| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1417 |
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| Symbol | |
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| ID | 3366914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1601999 |
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| End bp | 1602745 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637651758 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_234506 |
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| Protein GI | 66044665 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.210206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCGATA ACAATTCTGG CTCTGGCAGC AGCAGTTATC CGCCAGCGGG TTATGGCACG
TCCGGCGCCT ATGCCGGGGG AGGGGTTACG GCCCCTGCCT CGGCACAAGG TCAGCTGTTC
ATGCAGCTGC AGCAGATGCA GGACGAAATC GCGCGTTTGC GCGGTGTTGT CGAGGTCCAG
CAAAATGACA TCCAGCGCAT GAAGCAGGAA GCTCTGGAGC GTTATCAGGA ACTCGATCAA
CGTATAGCCA GTGGCTCAGC CGCTCCGGCT ACCAATAATT CCCAACCTGC TGGTGGCGCT
ATCGACGCCG GCGGGACGCC TTCGGCCCCC GCGGCTCAGC AGGCACCGGC AGCAGGCACC
GAGCCTCCTG ATCCGGCGAA GGAAAAGCTT TATTACGAAG CCGCCTTCGA TTTGATCAAG
GCAAAGGATT TCGACAAGGC CAGCCAGGCC TTCACCGCTT TCCTGCGCAA ATACCCAAAC
AGTTCGTATG CGGGCAATGC CCAATACTGG CTGGGTGAAG TCAATCTGGC CAAAGGCGAC
CTTCAGGGCG CCGGTCAGGC GTTCGCCAAA GTCAGTCAAC AGTATCCGAA GCATGCCAAG
GTGCCTGATT CGCTGTACAA GCTGGCTGAT GTCGAACGCC GTCTGGGTCA TACCGACAAG
GTGAAAGGCA TATTGCAGCA GGTCGTTGCC CAGTATCCTG GCACTTCAGC TGCACAATTG
GCGCAGCGAG ATCTGCAGCG CCTTTGA
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| Protein sequence | MVDNNSGSGS SSYPPAGYGT SGAYAGGGVT APASAQGQLF MQLQQMQDEI ARLRGVVEVQ
QNDIQRMKQE ALERYQELDQ RIASGSAAPA TNNSQPAGGA IDAGGTPSAP AAQQAPAAGT
EPPDPAKEKL YYEAAFDLIK AKDFDKASQA FTAFLRKYPN SSYAGNAQYW LGEVNLAKGD
LQGAGQAFAK VSQQYPKHAK VPDSLYKLAD VERRLGHTDK VKGILQQVVA QYPGTSAAQL
AQRDLQRL
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