| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1415 |
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| Symbol | tolB |
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| ID | 3366912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1600063 |
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| End bp | 1601364 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637651756 |
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| Product | translocation protein TolB |
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| Protein accession | YP_234504 |
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| Protein GI | 66044663 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00100672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAACC TTTTTCGAGG ACTGCTGGTC GTTCTCTGTT TCGCATCCGC AATGGTGTCG
GCAGAAGAAA AGAACATTCT GGTCACCAGC GGCAGTGACC GCGCAGCGCC AATCGCTGTT
GTGCCTTTCG GATGGCAGGG CGGTAGCGTT CTGCCTGAAG ACATGGCCGA AATCATAAGC
AACGATCTGC GCAACTCCGG TTACTACGCG CCGATCCCGA AGCAGAACAT GATCAGCTTG
CCGACCCAGG CCAGCGAAGT CATCTTCCGT GACTGGAAAG CGCTGGGTGC CCAGTACGTC
ATGGTCGGCA ACATCACGCC TGCCGGCGGA CGTCTGCAGA TCCAGTACGC GCTGTTCAAC
GTGGCCACCG AGCAGCAGGT GCTGACCGGT AACGTGTCGG GTACCAATGA TCAGTTGCGC
GACATGGCGC ACTACATTGC CGACCAGTCG TTCGAGAAGC TCACCGGTAT CAAGGGTGCG
TTTTCCACTC GTATGCTTTA CGTGACGGCC GAACGCTTCT CGGAAAACAA CACGCGTTAC
ACCTTGCAGC GTTCGGATTA CGACGGTGCT CGTGCAGTAA CCCTGTTGCA ATCCCGTGAG
CCAATCCTGT CGCCGCGTTT TGCGCCGGAC GGCAAACGTA TTGCCTATGT CTCGTTCGAA
CAGAAGCGTC CACGCATCTT CGTTCAGCAC ATCGACACCG GTCGTCGCGA ACAGATTACC
AACTTCGAAG GCCTGAACGG CGCGCCTGCC TGGTCGCCGG ATGGCAGCAA GCTGGCATTC
GTACTGTCCA AGGACGGCAA CCCGGAGATC TATGTAATCA ATCTGGCGTC GCGTCAATTG
AGCCGCGTGA CCAACGATTC TTCGATTGAT ACTGAACCTT TCTTCGGCAA GGACGGGTCT
ACGCTATACT TCACGTCGGA CCGTGGCGGC AAGCCACAGA TCTACAAGAC CAATATCAAT
GGCGGCGGTG CCGAACGCGT GACGTTCGTG GGTAACTACA ACGCCAACCC GAAATTGTCA
GCCGATGAAA AGACGCTGGT AATGATTCAC CGGCAGGACG GCTTCACTAA TTTCAAGGTG
GCAGTGCAGG ATTTGGCCCG CGGTAGCGTA AAAATCCTCA CAGATAGCAA CCTTGATGAG
TCGCCTACTG TTGCGCCCAA CGGCACCATG GTAATCTACG CCACCCGCCA GCAGGGCCGG
GGAGTCTTGA TGCTCGTGTC CATTAACGGA CGCGTAAGGC TCCCGCTTCC TACCGCTCAA
GGCGAAGTCA GAGAACCTTC CTGGTCCCCT TACCTGAACT GA
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| Protein sequence | MINLFRGLLV VLCFASAMVS AEEKNILVTS GSDRAAPIAV VPFGWQGGSV LPEDMAEIIS
NDLRNSGYYA PIPKQNMISL PTQASEVIFR DWKALGAQYV MVGNITPAGG RLQIQYALFN
VATEQQVLTG NVSGTNDQLR DMAHYIADQS FEKLTGIKGA FSTRMLYVTA ERFSENNTRY
TLQRSDYDGA RAVTLLQSRE PILSPRFAPD GKRIAYVSFE QKRPRIFVQH IDTGRREQIT
NFEGLNGAPA WSPDGSKLAF VLSKDGNPEI YVINLASRQL SRVTNDSSID TEPFFGKDGS
TLYFTSDRGG KPQIYKTNIN GGGAERVTFV GNYNANPKLS ADEKTLVMIH RQDGFTNFKV
AVQDLARGSV KILTDSNLDE SPTVAPNGTM VIYATRQQGR GVLMLVSING RVRLPLPTAQ
GEVREPSWSP YLN
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