Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1407 |
Symbol | |
ID | 3366904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1594073 |
End bp | 1594819 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637651748 |
Product | hypothetical protein |
Protein accession | YP_234496 |
Protein GI | 66044655 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.133281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGTC ATTCTAAGTG GGCGAACATC AAGCACCGCA AAGAGCGTCA GGATGCCAAA AAAGGCAAGA TTTTCACCAA GTGGATCCGT GAGCTGACCG TTGCTGCGCG TCAGGGCGGT GGTGATCCCG GTTCCAACCC GCGTCTGCGT CTGGCGCTGG ACAAGGCGCT TGGTGCGAAC ATGACCCGTG ACACCATTGA TCGTGCGGTG GCGCGAGGGG TAGGGGCCTC CGACGGTGAT GATGTCGAGG AGCTGGGTTA CGAGGGCTAC GGTCCGGGCG GCGTGGCGAT CATGGTCGAA ACCATGACCG ACAACCGCAA CCGTACCGCG GCGGCTGTGC GCCATGCATT CACCAAATGC GGCGGCAATC TCGGCACCGA CGGCTCTGTT GCCTACCTGT TCGATCGCAA GGGGCAGATC TCCTTCGCTG CCGGGGTCGA TGAGGATTCG CTGATCGAGG CTGCCATGGA GGCTGATGCT GACGATGTCG TGACCAACGA AGACGGCTCG ATCGATGTGT TCACATCGTT CTCCGGGTTT TATGCGGTGC GTAACGCATT GGAGGCTGCG GGTTTCAAGG CTGCAGACGC AGAGATTGTC ATGCTGCCGA CCACCAGTGC CGTGCTTGAT CTGGAAACCG CTGAAAAGGT ACTCAAGCTG ATTGATATGC TCGAAGACCT GGATGACGTG CAGAACGTGT ATTCAAATGC GGAGATCCCG GACGAAGTGA TGGAGCAACT GGGCTGA
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Protein sequence | MAGHSKWANI KHRKERQDAK KGKIFTKWIR ELTVAARQGG GDPGSNPRLR LALDKALGAN MTRDTIDRAV ARGVGASDGD DVEELGYEGY GPGGVAIMVE TMTDNRNRTA AAVRHAFTKC GGNLGTDGSV AYLFDRKGQI SFAAGVDEDS LIEAAMEADA DDVVTNEDGS IDVFTSFSGF YAVRNALEAA GFKAADAEIV MLPTTSAVLD LETAEKVLKL IDMLEDLDDV QNVYSNAEIP DEVMEQLG
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