Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1401 |
Symbol | |
ID | 3366898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1588962 |
End bp | 1589393 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637651742 |
Product | histidine triad (HIT) protein |
Protein accession | YP_234490 |
Protein GI | 66044649 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.541573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCGTTC TGGATTCCCG TCTTCAACAA GATACCCTGC CGATTGGCGA CTTTCCGTTG TGCCGGTTAC TGCTCTCCAA CGACAGTCAC TACCCATGGT TCATTCTGGT GCCGCGTCGG GCTGAGATCA CTGAAGTCTT TCAGCTGAGC GCTGCAGATC AGGTGCAGTT GTGGCAGGAG ACGACTGCAC TGTCCAGGGT GCTGAACGAG CTCTTTGATG CGGATAAAAT CAACGTTGCC GCCTTGGGGA ACGTGGTGAG CCAGCTGCAT ATGCACGTCA TCGTGCGCAA GCGTGACGAT GCCGCCTGGC CTGCGCCCGT GTGGGGCAAG CAGGCTGCCA TCGCTTATAC TGACGAACAG TTCTCGGCAA TCCGCCAGCA ACTGAAGCCG GTACTGACAA ATGATTTCCG ATTTGAGGAG GAGCAATCAT GA
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Protein sequence | MFVLDSRLQQ DTLPIGDFPL CRLLLSNDSH YPWFILVPRR AEITEVFQLS AADQVQLWQE TTALSRVLNE LFDADKINVA ALGNVVSQLH MHVIVRKRDD AAWPAPVWGK QAAIAYTDEQ FSAIRQQLKP VLTNDFRFEE EQS
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