Gene Psyr_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1401 
Symbol 
ID3366898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1588962 
End bp1589393 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content56% 
IMG OID637651742 
Producthistidine triad (HIT) protein 
Protein accessionYP_234490 
Protein GI66044649 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.541573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGTTC TGGATTCCCG TCTTCAACAA GATACCCTGC CGATTGGCGA CTTTCCGTTG 
TGCCGGTTAC TGCTCTCCAA CGACAGTCAC TACCCATGGT TCATTCTGGT GCCGCGTCGG
GCTGAGATCA CTGAAGTCTT TCAGCTGAGC GCTGCAGATC AGGTGCAGTT GTGGCAGGAG
ACGACTGCAC TGTCCAGGGT GCTGAACGAG CTCTTTGATG CGGATAAAAT CAACGTTGCC
GCCTTGGGGA ACGTGGTGAG CCAGCTGCAT ATGCACGTCA TCGTGCGCAA GCGTGACGAT
GCCGCCTGGC CTGCGCCCGT GTGGGGCAAG CAGGCTGCCA TCGCTTATAC TGACGAACAG
TTCTCGGCAA TCCGCCAGCA ACTGAAGCCG GTACTGACAA ATGATTTCCG ATTTGAGGAG
GAGCAATCAT GA
 
Protein sequence
MFVLDSRLQQ DTLPIGDFPL CRLLLSNDSH YPWFILVPRR AEITEVFQLS AADQVQLWQE 
TTALSRVLNE LFDADKINVA ALGNVVSQLH MHVIVRKRDD AAWPAPVWGK QAAIAYTDEQ
FSAIRQQLKP VLTNDFRFEE EQS