Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1397 |
Symbol | |
ID | 3366894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1582602 |
End bp | 1583666 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637651738 |
Product | DNA polymerase IV |
Protein accession | YP_234486 |
Protein GI | 66044645 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGC GCAAAATCAT CCACATCGAC TGTGACTGCT TTTATGCAGC CATTGAAATG CGTGACGAGC CCGACCTCGC CGGCAAACCG TTGGCGGTAG GCGGCTCTGC GGAGCGGCGC GGGGTGATTG CGACCTGTAA TTACGAGGCG CGCGCCTATG GCGTGCGTTC GGCCATGTCG TCCCGGCATG CGCTCAAGCT CTGCCCGGAC CTGACCATCG TCAAGCCGCG CATGGATGCC TATAAAGAAG CGTCGCGGGA AATCCACACG ATCTTTCGCG ATTACACCGA CCTTATAGAG CCGCTGTCTC TGGATGAGGC CTTTCTGGAT GTGTCCGAGG CCGGGCACTT TTCCGGCAGC GCCACGCGCA TCGCGCAGGA CATCCGTCGT CGGGTCTCGA ATCAATTGCA CATCACCGTG TCGGCGGGCG TTGCGCCCAA CAAGTTTCTC GCCAAGATCG CCAGCGACTG GAAAAAGCCC AACGGGTTGT TCGTCATTAC GCCGGATCAG GTCGAGGAAT TCGTCGCTTC CCTGCCAGTC ACCAAGCTTC ATGGCGTAGG CAAAGTCACC GCAGACAAAC TCGGCCGGCT GGGTATCGTC GACTGCGCCG ACCTGCGAAG CCGCAGCAAG CTCGCGCTGG TCCGGGAGTT CGGCAGCTTC GGTGAGCGCC TCTGGAGTCT GGCGCACGGC ATTGATGACC GACCGGTGCA GAATGACAGC CGACGTCAGT CAGTCAGCGT TGAAAATACC TACGACACGG ATCTGCCTGA TCTGGCGGCC TGCCTGGAAA AGCTGCCCGA CCTGCTGGAA ACCTTGAGTG GCCGGATGGC CAGAATGGAA GGGCAGTACC GGCCCGGCAA GCCGTTCGTC AAGGTGAAGT TTCATGACTT TACGCAGACG ACTCTGGAGC AGTCCGGAGC CGGAAGGGAT CTGGGCAGTT ATGAACAGTT GCTGGCTCAG GCGTTCGCCC GCGGTGGCAA GCCGGTCAGG TTGCTGGGCA TAGGCGTGCG CCTGCACGAC CTGCGTGCAG CCCATGAGCA GCTGGAATTG TTCTCTCGAC AATGA
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Protein sequence | MTQRKIIHID CDCFYAAIEM RDEPDLAGKP LAVGGSAERR GVIATCNYEA RAYGVRSAMS SRHALKLCPD LTIVKPRMDA YKEASREIHT IFRDYTDLIE PLSLDEAFLD VSEAGHFSGS ATRIAQDIRR RVSNQLHITV SAGVAPNKFL AKIASDWKKP NGLFVITPDQ VEEFVASLPV TKLHGVGKVT ADKLGRLGIV DCADLRSRSK LALVREFGSF GERLWSLAHG IDDRPVQNDS RRQSVSVENT YDTDLPDLAA CLEKLPDLLE TLSGRMARME GQYRPGKPFV KVKFHDFTQT TLEQSGAGRD LGSYEQLLAQ AFARGGKPVR LLGIGVRLHD LRAAHEQLEL FSRQ
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