Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1396 |
Symbol | |
ID | 3366891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1578990 |
End bp | 1581632 |
Gene Length | 2643 bp |
Protein Length | 880 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637651735 |
Product | hypothetical protein |
Protein accession | YP_234485 |
Protein GI | 66044644 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGACA ACATGTCCGA TTCCAATGAA ACCATTGATG CAGAGCAACC CGTCAGCCCC CCGCGCCATA ACTGGCGGGA GCTGCTGAGC AAATACCGAC AGCCCATCGG GCTGGCGGTG ATGCTGCTGT TGTTCAGCCT GGCCCTTATA GCCTGCCGCC ACATGCTGGT CGAAATGGAC TGGTATGCGC TGCACGACTC GCTGTTCGCA GTCCCCCTGC CCGCCCTGGG CGGTGCGCTG CTCGCGGCAA TCGTCGGCTA TATCATTCTG ATGGGCTATG AACTGTCCGC CAGTCGATAC GCCAATGTCG ACCTGCCTAT CAAGACGCTG CTTCTCGGCG GCTTCACCTC ATTTGCCATC GGCAATGCGG TCGGCCTGTC GATGCTGTCC GGTGGCTCGG TGCGCTACAG GCTTTATTCA CGCCATGGCG TAGGCGCAAT TGAAATCGCC CGCATGACCG TGTTCGCCAG CCTGTCACTG GGCTGTGCGC TGCCGCCGCT GGCTGCACTG GCCACGCTGA GCAACCTGTC AGGCGCGTCA CTGGCCCTCA AGCTTCCCGT CGACGTGCTG GCTGTAGTCG CTACAGCGGT GTTGATCGGC AGCCTGCTGC TGGCGGTGTT AATCTACCGT CGACGCCTGC CGGAACAGGA CATCCCGCAC AATATTCTGG TTCGTCTCGG TCGTCGCACC TTGCGCCTGC CGGATTTGAA GCTGACGCTG ATTCAGCTGG TGATCACCGC GCTGGACGTC GCCGCCGCAG CGATGGTGCT GTACCTGCTG CTGCCGCATG CGCCGCCGCT GGGTGCATTC ATCCTTATCT ACCTGCTGGC GCTCGCTGCT GGCGTGCTCA GCCATGTGCC TGGTGGCGTC GGCGTGTTCG AGGCGATTCT GCTCGCAGCC TTTGCCAACG AACTGGGTGC CGCCCCGCTC GCCGCTGCAC TGCTGCTGTA CCGCCTGATC TACGTGATCC TGCCGCTGCT GCTGGCCTGC CTTACCCTGC TGTTCACCGA GGCTCAGCGC CTGCTACCGA CCCGGCAGGC CATGCGCGTC GCCTCAGGGC TGGCGGCACC GATTCTGGCA CTACTGGTTT TCTTGTCGGG GGTGGTGCTG CTCTTCTCTG GTGCCACCCC TGAAATCGAT ACCCGTCTGG AAAACGTCGG CTTCATGATC CCGCATCGAC TGATCGATGC GTCGCACTTT GGAGCCAGTC TGGTGGGCGT GCTGTGCCTG CTGCTCGCCC AGGGCCTGCG TCGCCGGCTG TCGGCTGCCT GGATGCTGAC CTCTATCCTG CTGCTGGTAG GTGCAGTGCT GTCGATACTC AAGGGCTTCG ACTGGGAAGA AGCCAGCATG CTGCTGCTGA CCGCCTGCCT GCTGCTGACC TTCCGCCGTT CGTTCTACCG TCCAAGCCGC CTGCTAGAGC TGCCGTTCTC GCCGGTCTAC CTGATTGCCA GCATCTGTGT GGTCGGCGCC TCGATCTGGC TGCTGCTGTT CGCCTATCAG GACGTGCCCT ACAGTCACCA GTTGTGGTGG CAGTTCACCC TCGATGCAGA CGCCCCGCGC GGCCTGCGTT CGGCGCTCGG CAGCGCCGTG CTGCTGGTAG TGGTTTCGCT GACCTGGTTA CTGCGTACTG CCAGACCGGT CATCAAGCTG CCCGACGCCG AGGATCTGGA CAAGGCGGCC GAGATCCTCA AGGCCTCCAA ACAGCCCGAT GGCGGCCTGG TGCTGACCGG CGACAAGGCG ATCCTGTTCC ATCCGGCCGG CAATGCGTTC CTGATGTACT CGCATCGCGG CCGCAGTCTG GTAGCACTTT ACGACCCGAT CGGCCCCACA CAACAGCGTG CCGAGCTGAT CTGGCAGTTC CGCGACCTGT GCGACGTGCA CCATGCGCGC CCGGTGTTCT ATCAGGTACG TGCAGAAAAC CTGCCGTTCT ACATGGACAT CGGTCTCACG GCCATCAAGC TGGGTGAAGA AGCGCGCGTC GACCTGCATC GCTTCGACAT CGACGCCAAG GGCAAGGAGA TGAAAGACCT GCGTTACACC TGGAACCGGG GTGGCCGCGA CGGTCTTTCG CTGGAGATCT ACGAACCGGG CCAGGCGCCG ATCGACGAGC TGAAAGTGAT TTCCGACGCC TGGCTGACGG GCAAGAATGT CCGCGAAAAA GGCTTTTCGC TGGGCCGTTT CAGCACTGAG TACCTGAAGT ACTTCCGCAT TGCCATCGTG CACTTCCAGG GCAAGCCGGT CGCGTTCTCC AACCTGCTGG AAACCACCAG CCCGGAACTG GCCAGCCTGG ACCTGATGCG CTCCCACCCG GATGCACCCA AGCTGACCAT GGAATTCATG ATGGTCGGCC TGATTCTGCA TTACAAAGCC CAGGGCTACG CGCGCTTCAG CCTGGGCATG GTGCCTTTAT CGGGCCTGCA GCCACGACGC GGCGCACCCA TCACCCAGCG TCTGGGTTCG ATGATCTTCC GCCGTGGCGA ACAGCTGTAC AACTTCCAGG GGCTGCGTCG CTTCAAGGAC AAGTTCCAGC CCGATTGGGA ACCTCGTTAT ATGGCCGTGC CTGCCGGACT CGATCCGCTT GTGGCACTGG CTGACACCGC CGCCCTGATT GCGGGCGGCC TGACTGGATT GGTGAAACGC TGA
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Protein sequence | MRDNMSDSNE TIDAEQPVSP PRHNWRELLS KYRQPIGLAV MLLLFSLALI ACRHMLVEMD WYALHDSLFA VPLPALGGAL LAAIVGYIIL MGYELSASRY ANVDLPIKTL LLGGFTSFAI GNAVGLSMLS GGSVRYRLYS RHGVGAIEIA RMTVFASLSL GCALPPLAAL ATLSNLSGAS LALKLPVDVL AVVATAVLIG SLLLAVLIYR RRLPEQDIPH NILVRLGRRT LRLPDLKLTL IQLVITALDV AAAAMVLYLL LPHAPPLGAF ILIYLLALAA GVLSHVPGGV GVFEAILLAA FANELGAAPL AAALLLYRLI YVILPLLLAC LTLLFTEAQR LLPTRQAMRV ASGLAAPILA LLVFLSGVVL LFSGATPEID TRLENVGFMI PHRLIDASHF GASLVGVLCL LLAQGLRRRL SAAWMLTSIL LLVGAVLSIL KGFDWEEASM LLLTACLLLT FRRSFYRPSR LLELPFSPVY LIASICVVGA SIWLLLFAYQ DVPYSHQLWW QFTLDADAPR GLRSALGSAV LLVVVSLTWL LRTARPVIKL PDAEDLDKAA EILKASKQPD GGLVLTGDKA ILFHPAGNAF LMYSHRGRSL VALYDPIGPT QQRAELIWQF RDLCDVHHAR PVFYQVRAEN LPFYMDIGLT AIKLGEEARV DLHRFDIDAK GKEMKDLRYT WNRGGRDGLS LEIYEPGQAP IDELKVISDA WLTGKNVREK GFSLGRFSTE YLKYFRIAIV HFQGKPVAFS NLLETTSPEL ASLDLMRSHP DAPKLTMEFM MVGLILHYKA QGYARFSLGM VPLSGLQPRR GAPITQRLGS MIFRRGEQLY NFQGLRRFKD KFQPDWEPRY MAVPAGLDPL VALADTAALI AGGLTGLVKR
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