Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1394 |
Symbol | |
ID | 3366889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1575675 |
End bp | 1577570 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637651733 |
Product | K+ potassium transporter |
Protein accession | YP_234483 |
Protein GI | 66044642 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3158] K+ transporter |
TIGRFAM ID | [TIGR00794] potassium uptake protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.886731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAG CAAACAGTCA TGCGGAGGCC GGAGGCGCTG CCAAGCCCAT CGGGCTGCTG ATCGCCGCGG TAGGGGTGGT TTACGGCGAC ATCGGCACCA GTCCGCTGTA CACCCTCAAG GAGGTGTTTC AGGGTGGTTA CGGTGTGGAC GTGACCCATG ACGCGATTCT CGGCGTGCTG TCGCTGATCT TCTGGTCGCT GATCTGGGTG GTTTCGTTCA AGTACATGGC GTTCGTCCTG CGTGCCGATA ACCAGGGTGA GGGCGGCATC ATGGCGCTGA TGGCCCTGGC GCGGCGCGCT TCGGCCAAGC ATCCCCGGCT GCAAATGATG ATGGTGGTAT TCGGCCTGTT CGGCGCCGCA TTGTTCTACG GTGACAGCAT GATCACCCCG GCGGTTTCGG TGTTGTCGGC GATGGAAGGG CTGGAGCTGG CGTTCGATGG CCTCGATCAC TGGATCGTGC CCATGGCGCT GATTGTGCTG GTGGGGCTGT TTCTGATTCA GCGTCATGGC ACCGCGCGTA TCGGTGTGCT GTTCGGCCCG GTCATGGTGA CCTGGTTTCT GGTGCTCGGT GCGCTGGGGG TCTACGGCAT CATGCAGTCG CCGGAAGTGC TGAAAGCGGT CAACCCGGCA TGGGGCGTGA ATTTCTTCAT TATCCATCCG GGCATTGGCG TGGCCATTCT GGGTGCTGTG GTACTTGCCC TGACCGGTGC CGAGGCGCTG TATGCCGACA TGGGCCACTT CGGTCGCAAG CCGATTTCAC GCGCGTGGTT CATCCTTGTG CTGCCTGCGC TGCTGCTCAA CTATTTCGGT CAGGGTGCGC TGGTGCTGGG CAATCCTGAA ACGGTTCGTA ACCCGTTCTA CCTGCTGGCG CCGGGCTGGG CGTTGCTGCC ACTGATCGGC CTGTCGACGA TGGCGACCAT CATTGCCTCG CAAGCGGTGA TCTCCGGCGC CTTCTCGATG ACGCTGCAGG CGATCCAGCT GGGCTACATT CCGCGCATGC ACATCCAGCA CACCTCCAGC GACGCGCAAG GCCAGATCTA CATTGGTGCC GTCAACTGGG CGCTGATGGC GGGTGTCATT CTGCTGGTGA TCGGCTTCGA ATCGTCTGGC GCGCTGGCGT CTGCCTACGG CGTCGCGGTG ACCGGGACCA TGCTCTGCAC CACCATTCTG GTGTCGACGG TCATGCTGAT GCTCTGGAAA TGGCCGCCAT TGCTGGCTGT TCCGTTGCTG ATCTGCCTGC TGCTGGTGGA CGGTCTGTTC TTCGCGGCCA ACGTGCCGAA GATCTTCCAG GGCGGGGCCT TCCCGGTACT GGCGGGCGCG GTGTTGTTTA TCCTCATGAC CACCTGGAAG CGCGGCAAGC AGTTGCTCGC GGAGCGAATC GACGAGGGCG GCCTGCCATT GCCGATCTTC ATCGGCAGCA TTCGCGTCCA GCCGCCGCAC CGGGTACAGG GCACGGCAGT GTTCCTGACT GCACGTTCGG ATGCCGTGCC CCATGCGTTG CTGCATAACA TGCTGCACAA CCAGGTGTTG CACGAGCAAG TGGTGCTGTT GACGGTGGTG TATGAAGATT CGCCGCGTGT GCCGTCCGCT CAGCGCTTCG AAGTCGAATC CTATGGCGAA GGCTTCTATC GGGTGATCCT GCACTTCGGC TTTATCGATG AGCCTGACGT GCCGGCTGCG CTGGCCTTGT GTCACTTGCC GGAGCTGGAC TTCAGTCCGA TGCGCACCAC GTACTTCCTC AGCCGCGAGA CCGTGATCCC GTCCAAGATG GATGGCATGG CTCGCTGGCG TGAAGCGTTG TTCGCCTTCA TGCTCAAGAA CGCCAACGGC AACCTGCGCT TCTTCAAGCT GCCATTCAAC CGGGTGATCG AGTTAGGTAC CCAAGTGGAG ATGTAA
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Protein sequence | MSQANSHAEA GGAAKPIGLL IAAVGVVYGD IGTSPLYTLK EVFQGGYGVD VTHDAILGVL SLIFWSLIWV VSFKYMAFVL RADNQGEGGI MALMALARRA SAKHPRLQMM MVVFGLFGAA LFYGDSMITP AVSVLSAMEG LELAFDGLDH WIVPMALIVL VGLFLIQRHG TARIGVLFGP VMVTWFLVLG ALGVYGIMQS PEVLKAVNPA WGVNFFIIHP GIGVAILGAV VLALTGAEAL YADMGHFGRK PISRAWFILV LPALLLNYFG QGALVLGNPE TVRNPFYLLA PGWALLPLIG LSTMATIIAS QAVISGAFSM TLQAIQLGYI PRMHIQHTSS DAQGQIYIGA VNWALMAGVI LLVIGFESSG ALASAYGVAV TGTMLCTTIL VSTVMLMLWK WPPLLAVPLL ICLLLVDGLF FAANVPKIFQ GGAFPVLAGA VLFILMTTWK RGKQLLAERI DEGGLPLPIF IGSIRVQPPH RVQGTAVFLT ARSDAVPHAL LHNMLHNQVL HEQVVLLTVV YEDSPRVPSA QRFEVESYGE GFYRVILHFG FIDEPDVPAA LALCHLPELD FSPMRTTYFL SRETVIPSKM DGMARWREAL FAFMLKNANG NLRFFKLPFN RVIELGTQVE M
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