Gene Psyr_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1394 
Symbol 
ID3366889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1575675 
End bp1577570 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content61% 
IMG OID637651733 
ProductK+ potassium transporter 
Protein accessionYP_234483 
Protein GI66044642 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.886731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAG CAAACAGTCA TGCGGAGGCC GGAGGCGCTG CCAAGCCCAT CGGGCTGCTG 
ATCGCCGCGG TAGGGGTGGT TTACGGCGAC ATCGGCACCA GTCCGCTGTA CACCCTCAAG
GAGGTGTTTC AGGGTGGTTA CGGTGTGGAC GTGACCCATG ACGCGATTCT CGGCGTGCTG
TCGCTGATCT TCTGGTCGCT GATCTGGGTG GTTTCGTTCA AGTACATGGC GTTCGTCCTG
CGTGCCGATA ACCAGGGTGA GGGCGGCATC ATGGCGCTGA TGGCCCTGGC GCGGCGCGCT
TCGGCCAAGC ATCCCCGGCT GCAAATGATG ATGGTGGTAT TCGGCCTGTT CGGCGCCGCA
TTGTTCTACG GTGACAGCAT GATCACCCCG GCGGTTTCGG TGTTGTCGGC GATGGAAGGG
CTGGAGCTGG CGTTCGATGG CCTCGATCAC TGGATCGTGC CCATGGCGCT GATTGTGCTG
GTGGGGCTGT TTCTGATTCA GCGTCATGGC ACCGCGCGTA TCGGTGTGCT GTTCGGCCCG
GTCATGGTGA CCTGGTTTCT GGTGCTCGGT GCGCTGGGGG TCTACGGCAT CATGCAGTCG
CCGGAAGTGC TGAAAGCGGT CAACCCGGCA TGGGGCGTGA ATTTCTTCAT TATCCATCCG
GGCATTGGCG TGGCCATTCT GGGTGCTGTG GTACTTGCCC TGACCGGTGC CGAGGCGCTG
TATGCCGACA TGGGCCACTT CGGTCGCAAG CCGATTTCAC GCGCGTGGTT CATCCTTGTG
CTGCCTGCGC TGCTGCTCAA CTATTTCGGT CAGGGTGCGC TGGTGCTGGG CAATCCTGAA
ACGGTTCGTA ACCCGTTCTA CCTGCTGGCG CCGGGCTGGG CGTTGCTGCC ACTGATCGGC
CTGTCGACGA TGGCGACCAT CATTGCCTCG CAAGCGGTGA TCTCCGGCGC CTTCTCGATG
ACGCTGCAGG CGATCCAGCT GGGCTACATT CCGCGCATGC ACATCCAGCA CACCTCCAGC
GACGCGCAAG GCCAGATCTA CATTGGTGCC GTCAACTGGG CGCTGATGGC GGGTGTCATT
CTGCTGGTGA TCGGCTTCGA ATCGTCTGGC GCGCTGGCGT CTGCCTACGG CGTCGCGGTG
ACCGGGACCA TGCTCTGCAC CACCATTCTG GTGTCGACGG TCATGCTGAT GCTCTGGAAA
TGGCCGCCAT TGCTGGCTGT TCCGTTGCTG ATCTGCCTGC TGCTGGTGGA CGGTCTGTTC
TTCGCGGCCA ACGTGCCGAA GATCTTCCAG GGCGGGGCCT TCCCGGTACT GGCGGGCGCG
GTGTTGTTTA TCCTCATGAC CACCTGGAAG CGCGGCAAGC AGTTGCTCGC GGAGCGAATC
GACGAGGGCG GCCTGCCATT GCCGATCTTC ATCGGCAGCA TTCGCGTCCA GCCGCCGCAC
CGGGTACAGG GCACGGCAGT GTTCCTGACT GCACGTTCGG ATGCCGTGCC CCATGCGTTG
CTGCATAACA TGCTGCACAA CCAGGTGTTG CACGAGCAAG TGGTGCTGTT GACGGTGGTG
TATGAAGATT CGCCGCGTGT GCCGTCCGCT CAGCGCTTCG AAGTCGAATC CTATGGCGAA
GGCTTCTATC GGGTGATCCT GCACTTCGGC TTTATCGATG AGCCTGACGT GCCGGCTGCG
CTGGCCTTGT GTCACTTGCC GGAGCTGGAC TTCAGTCCGA TGCGCACCAC GTACTTCCTC
AGCCGCGAGA CCGTGATCCC GTCCAAGATG GATGGCATGG CTCGCTGGCG TGAAGCGTTG
TTCGCCTTCA TGCTCAAGAA CGCCAACGGC AACCTGCGCT TCTTCAAGCT GCCATTCAAC
CGGGTGATCG AGTTAGGTAC CCAAGTGGAG ATGTAA
 
Protein sequence
MSQANSHAEA GGAAKPIGLL IAAVGVVYGD IGTSPLYTLK EVFQGGYGVD VTHDAILGVL 
SLIFWSLIWV VSFKYMAFVL RADNQGEGGI MALMALARRA SAKHPRLQMM MVVFGLFGAA
LFYGDSMITP AVSVLSAMEG LELAFDGLDH WIVPMALIVL VGLFLIQRHG TARIGVLFGP
VMVTWFLVLG ALGVYGIMQS PEVLKAVNPA WGVNFFIIHP GIGVAILGAV VLALTGAEAL
YADMGHFGRK PISRAWFILV LPALLLNYFG QGALVLGNPE TVRNPFYLLA PGWALLPLIG
LSTMATIIAS QAVISGAFSM TLQAIQLGYI PRMHIQHTSS DAQGQIYIGA VNWALMAGVI
LLVIGFESSG ALASAYGVAV TGTMLCTTIL VSTVMLMLWK WPPLLAVPLL ICLLLVDGLF
FAANVPKIFQ GGAFPVLAGA VLFILMTTWK RGKQLLAERI DEGGLPLPIF IGSIRVQPPH
RVQGTAVFLT ARSDAVPHAL LHNMLHNQVL HEQVVLLTVV YEDSPRVPSA QRFEVESYGE
GFYRVILHFG FIDEPDVPAA LALCHLPELD FSPMRTTYFL SRETVIPSKM DGMARWREAL
FAFMLKNANG NLRFFKLPFN RVIELGTQVE M