| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1392 |
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| Symbol | rimO |
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| ID | 3366887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1572595 |
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| End bp | 1573938 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651731 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_234481 |
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| Protein GI | 66044640 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCG TCACCACGCC GTCCGCCCCC AAGGTTGGAT TCGTTTCACT GGGTTGCCCA
AAGGCACTCG TTGACTCTGA ACGCATCCTG ACCCAGCTGC GTATGGAAGG TTACGAAGTC
GTTGCGACCT ACGAGGACGC CGACGTGGTC GTGGTCAACA CCTGTGGCTT CATCGATACA
GCCAAGGCCG AGTCGCTGGA AGTGATCGGC GAAGCCATCA AGGAAAACGG CAAGGTCATC
GTGACCGGCT GCATGGGCGT CGATGCGAGT GTCATTCGCA ATGTGCACCC GAGCGTGCTG
TCGGTGACCG GCCCGCAGCA GTACGAGCAG GTGGTCAACG CAGTGCACGA TGTGGTGCCG
CCGCGCAAGG ATCACAACCC GTTGATCGAC CTGGTGCCGC CACAAGGCGT CAAGCTGACC
CCGCGTCACT ACGCGTATCT GAAAATTTCC GAAGGCTGCA ACCACAGTTG CAGCTTCTGC
ATCATCCCGT CGATGCGCGG CAAGCTGGTC AGCCGCCCGG TGGGTGATGT ACTGGACGAG
GCCAAGCGCC TGGTCAAATC CGGGGTGAAG GAACTGCTGG TCATTTCCCA GGACACCAGC
GCCTATGGCG TTGACGTCAA ATACCGCACC GGTTTCTGGG ACGGTCAGCC GGTCAAAACC
CGCATGACCG AGCTGTGCCA GGCGCTGGGC TCGATGGGTG TCTGGGTGCG CCTGCACTAT
GTCTACCCGT ACCCGCACGT CGACGAACTG ATCCCGTTGA TGGCCGCGGG CAAGATCCTG
CCGTACCTGG ACATCCCGTT CCAGCACGCC AGCCCGAAAA TCCTCAAGCT GATGAAGCGT
CCGGCCTTTG AAGACAAGAC GCTGGCGCGC ATCAAGAACT GGCGCGAGCA GTGCCCGGAC
CTGATCATCC GCTCGACCTT CATCGTCGGT TTTCCCGGTG AAACCGAAGA AGACTTCCAG
TACCTGCTGG ACTGGCTGAC CGAAGCGCAG CTGGACCGGG TTGGCTGCTT CCAGTACTCG
CCGGTTGAAG GCGCGCCCGC CAATCTGCTG GACGCGGCCA TCGTGCCGGA CGACGTCAAG
CAGGATCGCT GGGATCGCTT CATGGCTCAT CAGCAGGCAA TCAGCGCTGC GCGCCTGCAG
ATGAAGATCG GCAAGGAAAT CGAAGTGCTG ATCGACGAAG TCGACGATCG TGGTGCCGTG
GGCCGCTGCT TCTTCGACGC CCCGGAAATC GACGGCAACG TGTTCATCGG CCTGGACGAC
GGCAGCACCG TTCAGCCCGG GGACAAGATC ATGTGCCGGG TGACCGATGC CGACGAATAC
GACCTGTGGG CCGAGATGCT CTAA
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| Protein sequence | MSTVTTPSAP KVGFVSLGCP KALVDSERIL TQLRMEGYEV VATYEDADVV VVNTCGFIDT
AKAESLEVIG EAIKENGKVI VTGCMGVDAS VIRNVHPSVL SVTGPQQYEQ VVNAVHDVVP
PRKDHNPLID LVPPQGVKLT PRHYAYLKIS EGCNHSCSFC IIPSMRGKLV SRPVGDVLDE
AKRLVKSGVK ELLVISQDTS AYGVDVKYRT GFWDGQPVKT RMTELCQALG SMGVWVRLHY
VYPYPHVDEL IPLMAAGKIL PYLDIPFQHA SPKILKLMKR PAFEDKTLAR IKNWREQCPD
LIIRSTFIVG FPGETEEDFQ YLLDWLTEAQ LDRVGCFQYS PVEGAPANLL DAAIVPDDVK
QDRWDRFMAH QQAISAARLQ MKIGKEIEVL IDEVDDRGAV GRCFFDAPEI DGNVFIGLDD
GSTVQPGDKI MCRVTDADEY DLWAEML
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