| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1390 |
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| Symbol | |
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| ID | 3366885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1571249 |
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| End bp | 1571959 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651729 |
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| Product | RNA-binding S4 |
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| Protein accession | YP_234479 |
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| Protein GI | 66044638 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.553705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACC CCATTCGCCT TTCCAAACGC CTTATCGAGC TGGTCGGTTG CTCCCGCCGG
GAGGCCGAAC TGTTTATCGA GGGTGGCTGG GTCACTGTGG ACGGCGAGGT CATCGAAGAA
CCGCACTTCA AGGTCAGCAC CCAGAAAATC GAGCTCAGCC CGGACGCCAA GGCCGACTCT
CCGGAGCCTG TGACGATCAT CCTGCACAAA CCCGCCTCGG CAAGCGCCGA AGAAGCGTTG
CAGATGATCA CGCCGGGTAC GCTCTCCGTA GAGCACAGCT ACAGCAAGCG TCCGCTCAAG
GGCCATTTCA TGCGCCTTGA GGCGATTTCA AGCCTGCAGG CCAACGCCAG CGGCTTGATG
GTGTTCAGCC AGGACTGGAA AATCCTGCGC AAGCTCACCG ATGACCGCAG CAAGATCGAG
CAGGAATACG TGGTGGAAAT CTCGGGCGAG ATGGCTGCTC ATGGCCTCAA CCGGCTGAAC
CACGGCCTGA CCTACAAAGG CAAGGAGCTG CCAGCCGTGA AAGCCAGCTG GCAGAACGAG
AGCCGCCTGC GCTTTGCAAT GAAAAACCCG CAGCCCGGCA TCATCGCCCT GCTGTGCGAG
GCCGTCGGCC TGAAGATCGT CGCTATCCGC CGCATCCGCA TCGGCGGCGT GTCCATGGGC
AAACTGCCCG AGGGCCAGTG GCGCTACATG ACGGCCAAGG AAAAATTCTG A
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| Protein sequence | MTDPIRLSKR LIELVGCSRR EAELFIEGGW VTVDGEVIEE PHFKVSTQKI ELSPDAKADS
PEPVTIILHK PASASAEEAL QMITPGTLSV EHSYSKRPLK GHFMRLEAIS SLQANASGLM
VFSQDWKILR KLTDDRSKIE QEYVVEISGE MAAHGLNRLN HGLTYKGKEL PAVKASWQNE
SRLRFAMKNP QPGIIALLCE AVGLKIVAIR RIRIGGVSMG KLPEGQWRYM TAKEKF
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