Gene Psyr_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1387 
Symbol 
ID3366882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1569129 
End bp1569908 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID637651726 
Productferredoxin--NADP(+) reductase 
Protein accessionYP_234476 
Protein GI66044635 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA TGAACCACGA GCGTGTCCTC AGCGTCCACC ACTGGAACGA CACCCTCTTC 
AGTTTCAAGT GCACCCGCGA CCCTGGTTTG CGTTTCGAGA ACGGTCAGTT CGTGATGATC
GGTCTGCAGC AGCCAAACGG TCGCCCGCTC ATGCGCGCCT ATTCGATTGC CAGCCCGAAC
TGGGAAGAGC ATCTGGAGTT CTTCAGCATC AAGGTGCCTG ACGGCCCGCT GACTTCCCAG
CTGCAGCACC TCAAGGAAGG CGACGAGATC ATCATCAGCA AGAAGCCTAC GGGTACGCTG
GTGCTGGACG ATCTCAAGCC AGGCAAGCAT CTTTACCTGC TGAGCACCGG TACCGGCCTT
GCGCCGTTCA TGAGTGTCAT CCAGGATCCC GAAACCTACG AGCGTTTCGA GAAGGTCATC
CTCTGCCACG GCGTGCGTTA CGTGAACGAA GTCGCCTATC GCGAATTCAT CACCGAGCAC
CTGCCGCAGA ATGAATTCTT CGGTGAAGCG CTGCGTGACA AACTCATCTA CTACCCGACG
GTCACCCGCG AGCCTTTCGA GAACGAAGGT CGTCTGACTG ACCTGATGCG CAGTGGCAAG
CTGTTCAGCG ACATCGGCCT GCCGCCGATC AACCCGCAGG ACGACCGTGC CATGTTGTGC
GGCAGCCCGA GCATGCTCGA CGAGACCAGC GAAGTGCTCA ACAGCTTCGG CCTGACCGTT
TCGCCGCGTA TGCGTGAGCC GGGCGACTAT CTGATCGAGC GTGCGTTCGT CGAGAAGTAA
 
Protein sequence
MSNMNHERVL SVHHWNDTLF SFKCTRDPGL RFENGQFVMI GLQQPNGRPL MRAYSIASPN 
WEEHLEFFSI KVPDGPLTSQ LQHLKEGDEI IISKKPTGTL VLDDLKPGKH LYLLSTGTGL
APFMSVIQDP ETYERFEKVI LCHGVRYVNE VAYREFITEH LPQNEFFGEA LRDKLIYYPT
VTREPFENEG RLTDLMRSGK LFSDIGLPPI NPQDDRAMLC GSPSMLDETS EVLNSFGLTV
SPRMREPGDY LIERAFVEK