Gene Psyr_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1360 
Symbol 
ID3366855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1542753 
End bp1544090 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content65% 
IMG OID637651699 
ProductPP-loop 
Protein accessionYP_234449 
Protein GI66044608 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC CCTCACGCAC CGGTCATGAT CTTTCTGTCA GGCTTCTTCA AGTCCTGGCC 
CCCTGGCGCA ATGCGCCTGT CTGGCATGTC GGTTTCTCCG GCGGCCTCGA CTCAACCGTG
CTTTTGTATC TTCTGGCTGA ACTCGCCAGT CGCGAAACCC TGCCTGCGCT TAACGCCATC
CATGTGCACC ATGGCCTGCA GCCCGCTGCC GATGCCTGGC CAGAGCATTG TCAGCAGGTC
TGCAGGACGC TCGGGGTGGC ATTCGAGTCG GTTCGTCTTC AGGTCGAGCC GGGTGCAAGT
CTCGAGCAGG CGGCCCGGCA GGCGCGATAC AGCGCGTTCA GCGAGCGGCT GGGTGAGGGC
GAGGTGCTGC TGACTGGGCA GCATCGCGAT GATCAGGCCG AGACCCTGTT GTTCCGTCTG
CTGCGCGGCG CAGGCGTACG CGGTCTGGCT GCCATGCCCG ATCAGCGGGT GCTGGGGCGT
GGGCGTCTGG TGAGGCCGCT CCTGGATATG TCGCGAATGC AGTTGGAGGA TTACGCGCAT
CGGCACGGGC TGAACTGGAT CGAAGATCCC AGCAATGACG ATCAGCAGTT CTCGCGCAAT
TTTCTGCGCA GTCAGGTACT GCCGTTGCTG ACCTCCCGAT GGCCACAGGC AGCGGCCAGT
CTGGCGCGAA CCGCACGTCA CCTTGGCGAA GCGCAGCAAT TGCTGGACGA GCTTGCGCTG
CAGGATATTG CCCATGCCCA GGCTGCAACG TCGTTCGCTT GGCTTGGCCT GCCGGTATTG
AGTCTTGGGC CGATTGCCGC ATTGTCAGCA GCCCGGCAGC GCAATGCACT GCGTCACTGG
CTTGCGCCGC TGACGCGCCT GCCGGACACC GATCACTGGG CCGGCTGGGA GGCGTTGCGC
GATGCAGCGC AGGACGCGGG CCCGCTGTGG CGGCTCGCCG ATGGAACCCT GCACAGGGCG
CAGGGCTGCC TCTGGTGGGT GCCCGCTGGC TGGGAGCCGC TCGGTCATCA GGCAATGGAC
TGGTCGGACC CTTGCGCGGC GCTGCACCTG CCCGGCAATG GCCGCGTGGT TCTGCAAGGC
GAGGCGCCGT CGGGGTGTCT GCAAGTCCGC TATCGGCAGG GCGGTGAAGT GTTACGCCTG
GACGGGCGTG GCAGCCGTGA TCTCAAGCGC CTGCTCAACG AGCAGTCAGT ACCGGCGTTT
CTGCGCGGCA GATTGCCGCT GCTGTACCTC GATAACGTGC TGCTGGCGGT CGCCAACCTG
CCAGGGCTGG ACGGTTCGCC CAATGAAAAC TGGCGTTTGC GCTGGGTTGC GCCGACCGGC
GACCAAAGTT TGAGCTGA
 
Protein sequence
MTTPSRTGHD LSVRLLQVLA PWRNAPVWHV GFSGGLDSTV LLYLLAELAS RETLPALNAI 
HVHHGLQPAA DAWPEHCQQV CRTLGVAFES VRLQVEPGAS LEQAARQARY SAFSERLGEG
EVLLTGQHRD DQAETLLFRL LRGAGVRGLA AMPDQRVLGR GRLVRPLLDM SRMQLEDYAH
RHGLNWIEDP SNDDQQFSRN FLRSQVLPLL TSRWPQAAAS LARTARHLGE AQQLLDELAL
QDIAHAQAAT SFAWLGLPVL SLGPIAALSA ARQRNALRHW LAPLTRLPDT DHWAGWEALR
DAAQDAGPLW RLADGTLHRA QGCLWWVPAG WEPLGHQAMD WSDPCAALHL PGNGRVVLQG
EAPSGCLQVR YRQGGEVLRL DGRGSRDLKR LLNEQSVPAF LRGRLPLLYL DNVLLAVANL
PGLDGSPNEN WRLRWVAPTG DQSLS