| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1358 |
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| Symbol | dnaE |
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| ID | 3366853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1538020 |
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| End bp | 1541541 |
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| Gene Length | 3522 bp |
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| Protein Length | 1173 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637651697 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_234447 |
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| Protein GI | 66044606 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCTT CTTTCGTTCA TCTACGCCTG CACACCGAAT ATTCGCTGGT TGACGGTCTG
GTTCGGGTCA AACCGTTGAT CAAGGCGCTG ACCGGCATGA ACATGCCCGC CGTGGCGGTG
ACCGACCAGA ACAACATGTG CTCGCTGGTC AAGTTCTACA AGGCCGCCCA GGGCTCCGGC
ATCAAGCCGA TCTGCGGTGT CGACCTGTGG CTGGCGGGCA GGGACGAAGA TGCCGCGCTC
AGCCGCATCA GCCTGCTGGC CATGAATGCC CAGGGCTACC GCAACCTGAC CGAGTTGATT
TCCCGAGGCT TTATCGAAGG CCAGCGCAAC GGTCAGATCG TCATTCAGCG TCAGTGGGTC
GCGCAGGCCA GTGAAGGCGT GATTGCGCTT TCTGCGGCCA AGGAAGGCGA GATCGGCATG
GCCTTGCTCG GCGGCAATCC GGGGGAGGCC GACGAACTGC TGCGCGAGTG GCTGGAAGTC
TTTCCTGACC GCTTCTATAT CGAAGTGCAG CGCACCAACC GCGCCAATGA CGAAGAACAT
CTGCACGCTG CGGTGGCCCT GGCCGAGCGT CACGGTGCAC CGCTGGTGGC GACCAACGAT
GTGCGCTTCA TCAAACAGGC CGATTTCGAA GCTCACGAAA CCCGCGTATG CATCGGTGAA
GGGCGTGCGC TGGACGACCC GCGTCGCTCG CACAACTATA GCGATCAGCA ATACCTGAAA
AGCCCGGAAG AAATGGCCGA GCTGTTCAGC GATCTGCCGG AAGCGCTGGA AAACACCGTC
GAGATTGCCA AGCGCTGCAA CATCGACGTC AAGCTGGGCA CGCACTTCCT GCCCAACTTC
CCGATTCCCG ATGGCATGAC CATCGATGAG TATTTCCGCA AGGTCTCCTT CGACGGCCTC
GAAGAGCGTC TTGCAGTCCT GTTGCCCAAG GACACGACCG AAGATTACGA AGCCAAGCGT
CAGGTGTATG TCGACCGGCT GAATTTCGAG CTGGATATCA TTATCCAGAT GGGCTTTCCC
GGTTACTTCC TGATCGTGAT GGACTTCATC CAGTGGGCCA AGAGCAACGG CGTACCGGTG
GGGCCGGGTC GTGGTTCGGG TGCCGGATCG CTGGTTGCCT ATGTACAGAA GATCACCGAC
CTCGACCCGC TGGAATACGA CCTGCTGTTC GAACGCTTCC TGAACCCGGA GCGGGTTTCC
ATGCCTGACT TCGACGTCGA CTTCTGCATG GATGGTCGTG ACCGGGTGAT CGAATATGTG
GCCGAGAAGT ACGGTCGCAA CGCGGTCAGC CAGATCATCA CCTTCGGTTC CATGGCCGCC
AAGGCGGTGG TGCGTGACGT GGCGCGGGTG CAGGGCAAGT CTTACGGGCT GGCTGATCGT
CTGTCGAAGA TGATCCCGTT CGAGGTCGGC ATGACCCTCG AAAAAGCCTA CGAGCAGGAA
GAGATTCTTC GCGATTTCCT CAAGGTCGAT GAGGAAGCTG CAGAAATCTG GGAGATGGCG
CTCAAGCTCG AAGGCATTGT GCGTAACGTC GGCAAGCACG CCGGCGGTGT GGTTATTGCC
CCGACCAAGC TGACCGACTT CTCGCCGATC TATTGCGACG AGGCCGGTGA CGGTCTGGTG
ACCCAGTTCG ACAAGGACGA TGTCGAGGCT GCGGGGCTGG TGAAGTTCGA CTTCCTCGGT
CTGCGTACCC TGACCATCAT CGACTGGGCA CTCAAGACCA TCAACCGCGA CCGCGCCAAG
GTCAACGAAG AACCGCTGGA CATCGCGTTC ATCCCGCTCG ATGACATGCC GACCTATCAG
TTGCTACAGC GCGCCGAGAC CACGGCAGTG TTCCAGCTCG AGTCGCGCGG CATGAAAGAG
CTGATCAAAA AGCTCAAGCC CGACTGTCTG GAAGACCTGA TCGCACTGGT GGCACTGTTC
CGTCCCGGCC CGTTGCAATC GGGTATGGTC GACGACTTCA TCAACCGTAA ACACGGTCGC
GCCGAGCTGT CCTATCCGCA CGTCGATTAC CAGTACGAAG GCCTCAAGCC GGTACTGGCA
CCGACCTACG GCATCATCCT GTATCAGGAA CAGGTGATGC AGATCGCCCA GGTCATGGCC
GGTTACACCC TTGGCGGTGC GGACATGCTG CGTCGTGCCA TGGGTAAGAA AAAGCCCGAG
GAAATGGCCA AGCAGCGCGG TGGTTTCATC GATGGCTGCA AGACCAATAA CATCGACCCG
GACCTGGCCG GTAACATCTT CGACCTGGTG GAAAAGTTCG CCGGTTACGG TTTCAACAAG
TCCCACTCCG CGGCCTACGG GCTGGTGTCG TACCAGACTG CCTGGCTGAA GACTCACTAC
CCGGCGCCGT TCATGGCGGC GGTATTGTCG GCGGATATGC ACAACACCGA CAAGGTCGTG
ACCTTGATCG AAGAAGTGCG CACGATGAAG CTGCGCCTCG ATGCGCCGGA CGTGAACACC
TCGGAGTTCA AGTTCACGGT AAGCGACGAT GGCCGCATTC TTTATGGCCT CGGTGCGATC
AAGGGGGTAG GCGAGGGGCC GGTCGAGGCG ATTACCGACG CGCGCCAGAA CGGGCCGTTC
AAGGACCTTT TCGATTTCTG CGCCCGCGTC GACCTCAAGC GGGTCAACAA GCGAACCCTG
GATGGGCTGA TTCGCAGCGG TGCGCTGGAT CGCCTCGGGC CGTACTTCGA ACTGGAGCCC
AAGGCCTATC AGGCCAATAT CGACCGTAAC CGTTCGGTGC TGCTTGCCGC ACTGGAAGAA
GCCATTCAGG CAGCAGAGCA GACGGCGCGC AGTCGCGACA GTGGTCACTC GGACCTGTTC
GGCGGCCTGT TCGTCGAAGC GGATGCCGAT GTCTACGCCA ACCATCGCAA GACCCGCGAG
CTGAGCCTCA AGGATCGTCT GCGTGGCGAG AAGGAAACCC TGGGGCTGTA CCTGACCGGG
CATCCGATCG ATGAATATGA AGGCGAGATC CGCCGGTTCG CCCGGCAACG GATCATCGAT
CTCAAGCCGG CAAGAGACAC TCAGACGGTG GCAGGTCTGA TCATTGCCCT GCGCGTCATG
AAGAACAAGA AGGGCGACAA GATGGGGTTC ATTACCCTGG ACGATCGCTC GGCGCGCATC
GAGGCGTCGC TGTTTGCCGA AGCGTTCCAT TCGGCTCAGT CACTGTTGCA GACCGATGCT
ATGGTGGTGG TCGAGGGCGA AGTCAGTAAT GATGACTTCT CCGGCGGGCT GCGCCTGCGC
GCCAAGCGTG TCATGAGTAT CGAGGATGCC CGCACCAATC TGGCCGAGAG CCTGCGTGTG
ACGGTGCGTG CCGAAGCGCT CAAGGGCGAC CGGCTGCGCT GGCTGGGCGA TCTGTGCAAG
CGCCATCGCG GTGCCTGTCC GATCACGGTG GACTACACGG GGCAGGACGC CCGTGCATTG
CTGCAATTGG GAGAAGCATG GCGGATTGAT CCTGCGGACA GCTTGATTCA AGCTCTGCGT
GACCAGTTCG GACGTGAGAA CGTCTTTCTC CAGTATCGTT GA
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| Protein sequence | MPASFVHLRL HTEYSLVDGL VRVKPLIKAL TGMNMPAVAV TDQNNMCSLV KFYKAAQGSG
IKPICGVDLW LAGRDEDAAL SRISLLAMNA QGYRNLTELI SRGFIEGQRN GQIVIQRQWV
AQASEGVIAL SAAKEGEIGM ALLGGNPGEA DELLREWLEV FPDRFYIEVQ RTNRANDEEH
LHAAVALAER HGAPLVATND VRFIKQADFE AHETRVCIGE GRALDDPRRS HNYSDQQYLK
SPEEMAELFS DLPEALENTV EIAKRCNIDV KLGTHFLPNF PIPDGMTIDE YFRKVSFDGL
EERLAVLLPK DTTEDYEAKR QVYVDRLNFE LDIIIQMGFP GYFLIVMDFI QWAKSNGVPV
GPGRGSGAGS LVAYVQKITD LDPLEYDLLF ERFLNPERVS MPDFDVDFCM DGRDRVIEYV
AEKYGRNAVS QIITFGSMAA KAVVRDVARV QGKSYGLADR LSKMIPFEVG MTLEKAYEQE
EILRDFLKVD EEAAEIWEMA LKLEGIVRNV GKHAGGVVIA PTKLTDFSPI YCDEAGDGLV
TQFDKDDVEA AGLVKFDFLG LRTLTIIDWA LKTINRDRAK VNEEPLDIAF IPLDDMPTYQ
LLQRAETTAV FQLESRGMKE LIKKLKPDCL EDLIALVALF RPGPLQSGMV DDFINRKHGR
AELSYPHVDY QYEGLKPVLA PTYGIILYQE QVMQIAQVMA GYTLGGADML RRAMGKKKPE
EMAKQRGGFI DGCKTNNIDP DLAGNIFDLV EKFAGYGFNK SHSAAYGLVS YQTAWLKTHY
PAPFMAAVLS ADMHNTDKVV TLIEEVRTMK LRLDAPDVNT SEFKFTVSDD GRILYGLGAI
KGVGEGPVEA ITDARQNGPF KDLFDFCARV DLKRVNKRTL DGLIRSGALD RLGPYFELEP
KAYQANIDRN RSVLLAALEE AIQAAEQTAR SRDSGHSDLF GGLFVEADAD VYANHRKTRE
LSLKDRLRGE KETLGLYLTG HPIDEYEGEI RRFARQRIID LKPARDTQTV AGLIIALRVM
KNKKGDKMGF ITLDDRSARI EASLFAEAFH SAQSLLQTDA MVVVEGEVSN DDFSGGLRLR
AKRVMSIEDA RTNLAESLRV TVRAEALKGD RLRWLGDLCK RHRGACPITV DYTGQDARAL
LQLGEAWRID PADSLIQALR DQFGRENVFL QYR
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