Gene Psyr_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1357 
SymbolrnhB 
ID3366852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1537295 
End bp1537951 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content60% 
IMG OID637651696 
Productribonuclease HII 
Protein accessionYP_234446 
Protein GI66044605 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAA CAGGTCTGGA TTTTACCCTC GTCGAGGACC TGGTGGCGGG TGTTGATGAA 
GTGGGTCGCG GCCCGCTGTG CGGTGCCGTG GTAACCGCCG CCGTCATTCT CGACCCGACC
AGGCCCATTC TCGGTCTCAA TGATTCGAAG AAACTGACCG AAGCCAGGCG CGAAAAGCTC
TACGTCGAAA TTCAGGAGAA AGCCCTGTGC TGGTTCATCG CCAGGGCTGA AGTCGAAGAG
ATCGACCAGC TGAATATCCT CCACGCCACG ATGCTGGCCA TGCAGCGCGC CGTCGAAGGG
TTGAGTATCA CGCCCAGACT GGCGCTTATC GACGGCAACC GCTGCCCGCA GTTGTCGGTG
CCCTCGGCGC CGGTGGTAAA GGGTGACTCC AAGGTACCTG CCATCGCTGC CGCCTCGATT
CTTGCCAAGG TGAGTCGGGA TCGGGAAATG GCAGCGTTCG AACTCATCTA TCCGGGTTAT
GGCATCGGTG GGCACAAGGG TTATCCTACG CCGGTGCATC TGGAAGCACT GGCCCGGCTC
GGGCCGACGC CCATTCATCG GCGTTCCTTC GCTCCGGTGC GTGCAGCCCA TGAAGCGCGC
GCAACGATAA TGATGGGTGG CTCGATTTCG CCTTCAGTCG GGTTGCTGCA GGACTGA
 
Protein sequence
MMQTGLDFTL VEDLVAGVDE VGRGPLCGAV VTAAVILDPT RPILGLNDSK KLTEARREKL 
YVEIQEKALC WFIARAEVEE IDQLNILHAT MLAMQRAVEG LSITPRLALI DGNRCPQLSV
PSAPVVKGDS KVPAIAAASI LAKVSRDREM AAFELIYPGY GIGGHKGYPT PVHLEALARL
GPTPIHRRSF APVRAAHEAR ATIMMGGSIS PSVGLLQD