| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1356 |
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| Symbol | lpxB |
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| ID | 3366851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1536144 |
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| End bp | 1537286 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637651695 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_234445 |
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| Protein GI | 66044604 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGTC CACTCTGTAT CGCTCTGGTC GCGGGTGAAG CATCCGGCGA TATCCTCGGA
TCCGGTCTGA TGCGTGCCCT CAAGGTGCGC CATCCCGACA TCCGCTTCAT TGGTGTCGGC
GGTCCGTTGA TGGAAGCCGA AGGCATGCAG TCCTCCTTCC CGATGGAACG CCTGTCGGTG
ATGGGGCTGG TTGAAGTGCT CGGGCGACTG CGCGAGCTGC TGGCCCGGCG CAAGCTGTTG
GTCCAGACCC TGATCAATGA AAAGCCGGAC GTCTTCATCG GCATTGACGC GCCTGACTTC
ACGCTCAATA TCGAACTTCA GCTACGTCGC GCCGGGATCA AGACTGTGCA CTACGTCAGC
CCGTCGGTCT GGGCCTGGCG TCAGAAGCGT GTGCTGAAGA TTCGTGAAGG CTGTGACCTG
ATGCTGACCC TGTTGCCATT CGAAGCGCGT TTCTACGAAG AGCAGGGCGT ACCGGTGCGT
TTTGTCGGTC ATCCGCTGGC AGACACAATT CCTCTGGAGT CTGATCGTGC AGGTGCTCGC
GCAGGCCTGG GATTGGCGCA GGAGACGCCG GTTGTCGCGC TGATGCCGGG CAGCCGGGGC
GGTGAAGTGG GGCGTCTGGG CGGGTTGTTT TTCGACACGG CCGAGCGGCT GCTTGCCCGG
TGCCCAGAGC TGCGCTTCGT ACTGCCCTGC GCCAGCCCGC AGCGACGGGC TCAGGTGGAG
CAGTTGCTGC AGGGGCGTGA TCTGCCCGTC ACGCTGCTCG ACGGCCAGTC GCATGTTGCT
CTGGCCGCGT GCGATGCGGT ACTGATCGCC TCCGGCACCG CGACCCTGGA GGCGCTGCTT
TACAAGCGCC CCATGGTAGT TGCCTATCGC CTGGCGCCGC TGACCTTCTG GATACTCAAG
CGAATGGTCA AAAGCCCTTA CGTGTCGCTG CCGAACCTGC TGGCCCAGCG TCTGCTGGTG
CCTGAGCTGC TGCAGGACGA CGCTACGCCA GAAGCCCTGG CGCGTACGCT GCTGCCATTG
ATCGACGACG GTCGCGAGCA AACCGCCGGT TTTGATGCCA TTCACCGGAT CCTGCGCCGC
GATGCGTCCA ATCAGGCCGC CGATGCGGTA TTGAGCCTGC TCGGACGGTC GCCTTCACTG
TGA
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| Protein sequence | MPSPLCIALV AGEASGDILG SGLMRALKVR HPDIRFIGVG GPLMEAEGMQ SSFPMERLSV
MGLVEVLGRL RELLARRKLL VQTLINEKPD VFIGIDAPDF TLNIELQLRR AGIKTVHYVS
PSVWAWRQKR VLKIREGCDL MLTLLPFEAR FYEEQGVPVR FVGHPLADTI PLESDRAGAR
AGLGLAQETP VVALMPGSRG GEVGRLGGLF FDTAERLLAR CPELRFVLPC ASPQRRAQVE
QLLQGRDLPV TLLDGQSHVA LAACDAVLIA SGTATLEALL YKRPMVVAYR LAPLTFWILK
RMVKSPYVSL PNLLAQRLLV PELLQDDATP EALARTLLPL IDDGREQTAG FDAIHRILRR
DASNQAADAV LSLLGRSPSL
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