Gene Psyr_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1352 
Symbol 
ID3366847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1533281 
End bp1533760 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content56% 
IMG OID637651691 
ProductOuter membrane protein (OmpH-like) 
Protein accessionYP_234441 
Protein GI66044600 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2825] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCCA CCGTACTGGT CGCCAGCCCT GCATTCGCCG ACATGAAAAT TGCGGTACTG 
AACTATCAGA TGGCCCTGCT GGAATCGGAC GCTGCCAAGC GTTACGCAGT GGACGCCGAG
AAGAAGTTCG GCCCGCAACT GACCAAGCTG AAAAGCCTGG AAAGCAGCGC CAAGGGTATT
CAGGATCGTC TGGTCAGCGG TGGCGACAAG ATGGCTCAGC CTGAGCGCGA GCGTCTGGAG
CTTGAATTCA AGCAAAAGGC TCGTGATTTC CAGTTCCAGT CCAAGGAACT GAACGAAGCC
AAGGCCGTTG CTGACCGCGA AATGCTCAAG CAGTTGAAGC CGAAGCTGGA TCAGGCTGTA
GAAGAAGTCA TCAAGAAAGG TGGTTTCGAC CTGGTCTTCG AGCGCGGTGC GGTGATCGAC
GTCAAGCCAC AGTATGACGT GACTCGCCAG GTCATCGAGC GCATGAACCA GCTGAAGTAA
 
Protein sequence
MLATVLVASP AFADMKIAVL NYQMALLESD AAKRYAVDAE KKFGPQLTKL KSLESSAKGI 
QDRLVSGGDK MAQPERERLE LEFKQKARDF QFQSKELNEA KAVADREMLK QLKPKLDQAV
EEVIKKGGFD LVFERGAVID VKPQYDVTRQ VIERMNQLK