Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1352 |
Symbol | |
ID | 3366847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1533281 |
End bp | 1533760 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637651691 |
Product | Outer membrane protein (OmpH-like) |
Protein accession | YP_234441 |
Protein GI | 66044600 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2825] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCCA CCGTACTGGT CGCCAGCCCT GCATTCGCCG ACATGAAAAT TGCGGTACTG AACTATCAGA TGGCCCTGCT GGAATCGGAC GCTGCCAAGC GTTACGCAGT GGACGCCGAG AAGAAGTTCG GCCCGCAACT GACCAAGCTG AAAAGCCTGG AAAGCAGCGC CAAGGGTATT CAGGATCGTC TGGTCAGCGG TGGCGACAAG ATGGCTCAGC CTGAGCGCGA GCGTCTGGAG CTTGAATTCA AGCAAAAGGC TCGTGATTTC CAGTTCCAGT CCAAGGAACT GAACGAAGCC AAGGCCGTTG CTGACCGCGA AATGCTCAAG CAGTTGAAGC CGAAGCTGGA TCAGGCTGTA GAAGAAGTCA TCAAGAAAGG TGGTTTCGAC CTGGTCTTCG AGCGCGGTGC GGTGATCGAC GTCAAGCCAC AGTATGACGT GACTCGCCAG GTCATCGAGC GCATGAACCA GCTGAAGTAA
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Protein sequence | MLATVLVASP AFADMKIAVL NYQMALLESD AAKRYAVDAE KKFGPQLTKL KSLESSAKGI QDRLVSGGDK MAQPERERLE LEFKQKARDF QFQSKELNEA KAVADREMLK QLKPKLDQAV EEVIKKGGFD LVFERGAVID VKPQYDVTRQ VIERMNQLK
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