| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1349 |
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| Symbol | |
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| ID | 3366844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1528101 |
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| End bp | 1529291 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637651688 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_234438 |
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| Protein GI | 66044597 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.376549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.366185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGGTC CGCAACAAAT CTCCATTCTG GGCGCAACCG GTTCCATAGG GCTGAGCACT
CTGGACGTGG TTGCCCGTCA TCCAGCGCTT TATCAAGTGT TCGCGCTCAC AGGCTTCAGT
CGTCTGGATG AATTGCTGGC CTTGTGCATC AGGCACACAC CGCAGTACGC CGTAGTGCCG
GATCAGGTGG TCGCTCGCAA ACTGCAGGAC GACCTGGCAG CGGCCGGGCT CGATACCCGG
GTGCTGGTCG GCGAGGGCGG TCTGTGCGAA GTGGCCGCAG ATCCTCGGGT CGATGCAGTC
ATGGCCGCCA TTGTCGGGGC TGCCGGCTTG CGCCCGACGC TGGCTGCGGT AGAGGCGGGC
AAGAAGGTAT TGCTGGCCAA CAAGGAAGCG CTGGTCATGT CCGGCGCCCT GTTCATGCAG
GCTGTTCGGC AAAATGGCGC TGTGCTGTTG CCGATCGACA GCGAGCACAA TGCGATCTTC
CAGTGCCTGC CCGGCGATTT CGCTCGCGGG CTGGGTGCCG TTGGCGTCCG GCGGATCATG
TTGACTGCCT CGGGCGGGCC GTTTCGCGAA ACGCCGCTGG AGCAGTTGCA CAACGTCACG
CCTGAGCAGG CCTGTGCCCA TCCGGTCTGG TCGATGGGGC GCAAGATCTC CGTCGATTCG
GCAACCATGA TGAACAAGGG GCTTGAGCTC ATCGAAGCCT GCTGGCTGTT CGATGCGCGG
CCGGATCAGG TCGAGGTGGT CATTCACCCG CAAAGCGTGA TCCACTCGCT GGTCGATTAT
GTCGATGGCT CGGTGCTGGC TCAATTGGGC AATCCCGACA TGCGTACGCC CATCGCCAAT
GCATTGGCAT GGCCTGCGCG TGTAGACTCT GGCGTTGCGC CACTGGACCT GTTTCGTATC
GGTCAGCTTG ATTTTCAGGC GCCGGACGAG GAGCGATTCC CTTGTCTGCG GCTGGCCCGA
CAGGCGGCAG AGGCTGGAGG CAGTGCACCT GCCATGCTCA ACGCGGCCAA TGAAGTGGCC
GTCGCGGCAT TCCTCGATGG GCGTATCCGC TACCTGGAAA TCGCCGGTAT TATCGAAGAG
GTTCTGGATC ATGAGCCTGT CACCGCGGTC GAAGGGCTCG AAGCGGTGTT CGCCGCCGAT
GCAAAAGCGC GTTTGCTGGC GGGCCAATGG TTTGAAAGAC ACGGGCGATA G
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| Protein sequence | MSGPQQISIL GATGSIGLST LDVVARHPAL YQVFALTGFS RLDELLALCI RHTPQYAVVP
DQVVARKLQD DLAAAGLDTR VLVGEGGLCE VAADPRVDAV MAAIVGAAGL RPTLAAVEAG
KKVLLANKEA LVMSGALFMQ AVRQNGAVLL PIDSEHNAIF QCLPGDFARG LGAVGVRRIM
LTASGGPFRE TPLEQLHNVT PEQACAHPVW SMGRKISVDS ATMMNKGLEL IEACWLFDAR
PDQVEVVIHP QSVIHSLVDY VDGSVLAQLG NPDMRTPIAN ALAWPARVDS GVAPLDLFRI
GQLDFQAPDE ERFPCLRLAR QAAEAGGSAP AMLNAANEVA VAAFLDGRIR YLEIAGIIEE
VLDHEPVTAV EGLEAVFAAD AKARLLAGQW FERHGR
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