Gene Psyr_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1346 
Symbolfrr 
ID3366841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1525960 
End bp1526517 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content58% 
IMG OID637651685 
Productribosome recycling factor 
Protein accessionYP_234435 
Protein GI66044594 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000999324 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.327486 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACG AAATCAAGAA AGATGCTCAG ACCCGTATGC AGAAGAGTCT GGAGTCGCTG 
ACCCATGCCT TCACCCGTAT CCGTACCGGC AAGGCGCATC CGAGCATCCT GGGTGGTGTG
ATGGTTCCTT ACTACGGCGC AGATACCCCG CTGAGCCAGG TGGCCAACGT GACCGTCAAG
GACTCGCGTA CCCTTCAGGT CGTGGCGTTC GAGCGCAACA TGCTGGCGGC TGTCGACAAG
GCCATCCAGA GCTCCGGTCT GGGCTTCAAT CCGACCAACC TGGGTGAGTT GCTGCTGATC
TCCATGCCGG CGCTGACCGA AGAAACCCGC AAGGGCTTCA CCAAGCAGGC GCGCGATGCT
GCAGAAGATG CCCGTGTGGC CGTCCGTAAC ATCCGCCGTG ACGCCTTGAG CCAGTTGAAA
GACCTGGTCA AGGAGAAGGA AATCAGCGAA GACGAAGAGC GCCGTGCGGC TGACGACGTA
CAGAAGCTGA CTGACAAGTT CGTGGCGGAA ATCGAAGTTG CGGTCAAGCA GAAAGAAGCC
GATCTGATGG CTGTTTAA
 
Protein sequence
MINEIKKDAQ TRMQKSLESL THAFTRIRTG KAHPSILGGV MVPYYGADTP LSQVANVTVK 
DSRTLQVVAF ERNMLAAVDK AIQSSGLGFN PTNLGELLLI SMPALTEETR KGFTKQARDA
AEDARVAVRN IRRDALSQLK DLVKEKEISE DEERRAADDV QKLTDKFVAE IEVAVKQKEA
DLMAV