| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1340 |
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| Symbol | |
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| ID | 3366835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1518114 |
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| End bp | 1519307 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651679 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_234429 |
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| Protein GI | 66044588 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.313049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAACG CCATGCAACT GCTTCAGCCT TACCCTTTCG AGAAGCTGCG CGCCTTGCTG
GCCGGCGTGA CACCCAACCC GGAAAAGCGT CCGGTAGCAC TGTCCATCGG CGAACCGAAG
CACCGCTCTC CCGATTTCGT TGCCAAAGCA CTGGCAGACA ACCTCGATCA GATGGCGGTT
TACCCGACCA CGCTGGGTAT TCCTGCGCTG CGCGAAGCCA TTGCCGGCTG GTGCAGCCGT
CGATTCGGCG TGCCACAGGG CTGGATCGAT CCGGCGCGCA ATGTATTACC GGTCAACGGC
ACGCGCGAAG CGCTGTTCGC CTTCACCCAG ACCGTAGTCA ATCGCAGTGA TGACGGCCTG
GTGATCAGCC CGAATCCGTT TTACCAGATC TATGAAGGCG CCGCGTTTCT GGCCGGAGCC
CAACCGCACT ACCTGCCCTG CCTGAGCGAT AACGGGTTCA ATCCCGATTT CGATGCCGTC
AGCCCGGACA TCTGGAAGCG TTGCCAGATC CTCTTTCTGT GCTCACCAGG CAACCCGACC
GGGGCGCTGA TTCCGGTTGA AACCCTGAAA AAGCTCATCG CCCTGGCCGA CGAACATGAC
TTTGTCATTG CTGCGGACGA GTGCTACAGC GAGCTGTACT TCGATGAGCA GACCCCGCCG
CCGGGCCTGC TCAGCGCCTG CGTCGAGCTG GGCCGCGAGG ATTTCAAACG CTGCGTGGTC
TTCCACAGCC TGTCCAAGCG CTCCAATCTG CCGGGCCTGC GCTCAGGTTT TGTGGCGGGT
GACGCCCAGA TCCTCAAGGC CTTCCTGCTG TATCGCACCT ATCACGGCTG CGCCATGCCG
GTTCAGACTC AACTGGCCAG CATCGCCGCC TGGAATGATG AGGAGCACGT ACGCGCCAAC
CGTGATCTGT ACCGGGAAAA GTTCGCTGCG GTGCTCGACA TCCTGACCCC GGTGCTCGAC
GTTCAACGCC CGGACGGCGG CTTTTACCTG TGGCCGAACG TCGGTACCGA TGACGCTGCA
TTTTGCCGCG ATCTGTTCGT CGATCAGCAC GTCACTGCAG TACCGGGCTC GTACCTTTCC
CGCGAAGTGG ATGGCGTCAA CCCTGGCGCA GGCCGGGTGC GTCTTGCGCT CGTGGCCCCG
TTGGCCGAAT GCATCGAAGC GGCCGAACGT ATCCGCGCAT TCCTGAGCAA GTAA
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| Protein sequence | MNNAMQLLQP YPFEKLRALL AGVTPNPEKR PVALSIGEPK HRSPDFVAKA LADNLDQMAV
YPTTLGIPAL REAIAGWCSR RFGVPQGWID PARNVLPVNG TREALFAFTQ TVVNRSDDGL
VISPNPFYQI YEGAAFLAGA QPHYLPCLSD NGFNPDFDAV SPDIWKRCQI LFLCSPGNPT
GALIPVETLK KLIALADEHD FVIAADECYS ELYFDEQTPP PGLLSACVEL GREDFKRCVV
FHSLSKRSNL PGLRSGFVAG DAQILKAFLL YRTYHGCAMP VQTQLASIAA WNDEEHVRAN
RDLYREKFAA VLDILTPVLD VQRPDGGFYL WPNVGTDDAA FCRDLFVDQH VTAVPGSYLS
REVDGVNPGA GRVRLALVAP LAECIEAAER IRAFLSK
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