| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1339 |
|---|
| Symbol | |
|---|
| ID | 3366834 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1517134 |
|---|
| End bp | 1517967 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637651678 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_234428 |
|---|
| Protein GI | 66044587 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.436926 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAC CCGCTGTTAC CCAAGGCGTA AAACTGCCCG CATCCTGCTG CATGCGCAGC
GCTGGAAATC ACCAGGCTTC GTATGATGCA GCGATTCGCG AAAACCCCGC CAACGCGCCG
ATCACCCCTG CTTACCCATC GGAAACCGGC GCCGACACCA GCCAGTCAGG TCGCCAGGCG
CGCCTGCTGG TTTCGTTCAG CAAATACTGG GCTCGCGGGC GAACCCTGAA AGTTCTTTTT
TTGAAGAATC CTCCTGCCAG CCTGACAGCA CCCATCGTCG AGGCCGCCCG CAAGTGGCTG
CCGCACATAA ACCTGAAATT CGAGTTCGTG ACGGACGGGG CGAGTGATAT CCGAATTGGC
TTCAATGAAC ACCTGAACTG GAGCGCCATA GGCACCGATA CCCTGCTGGC CGGACCTGAT
GAGGCTACGA TGGAGTTCAA CCTAAAAGAG CTGTACACGG CGGACCTGAA GCCGATGCCG
GAATTGACGC GCATCGTACT GCATGAATTC GGGCACGCCT TGGGCGCGGT TCACGAGCAT
CAGCATCCAC AGGCAAACAT CCCCTGGAAC GAGCCGCTCT TGCGCTCACT GCTTTCGCAA
ACCGGGTTGA GTGACGAAGA GATCAATACC AATTTTTTCG ACAGGTACGA GGCCGCAGAC
TTCCACTACT CGGCTTACGA CCGTGATTCG GTCATGCATT TCGATATCCC CAACGGCCTG
ACCCTCGGCG ACTTCGAGAT CATCAATGTG GGCAAGACAC TCAGCAGCAA TGACATCGCC
GTGATGGGCG CTATCTACGC GGACCGTGGC AACTCGAAAT TTGAAACGCT CTGA
|
|---|
| Protein sequence | MTAPAVTQGV KLPASCCMRS AGNHQASYDA AIRENPANAP ITPAYPSETG ADTSQSGRQA
RLLVSFSKYW ARGRTLKVLF LKNPPASLTA PIVEAARKWL PHINLKFEFV TDGASDIRIG
FNEHLNWSAI GTDTLLAGPD EATMEFNLKE LYTADLKPMP ELTRIVLHEF GHALGAVHEH
QHPQANIPWN EPLLRSLLSQ TGLSDEEINT NFFDRYEAAD FHYSAYDRDS VMHFDIPNGL
TLGDFEIINV GKTLSSNDIA VMGAIYADRG NSKFETL
|
|---|
| |