Gene Psyr_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1333 
Symbol 
ID3366828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1512659 
End bp1513489 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content61% 
IMG OID637651672 
ProductUBA/THIF-type NAD/FAD binding fold 
Protein accessionYP_234422 
Protein GI66044581 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.100552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAG AAGATCCGCG GTTCGCTGGT ATCGCCCGTC TATATGGCAT CGAAGGGCTG 
GCACGCCTGC GCGCGGCCCA TGTGGCGGTG GTGGGTATCG GCGGGGTGGG CTCCTGGGCG
GCGGAAGCCA TGGCGCGCAG TGGTGTGGGC GAGATTTCGC TGTTCGACAT GGACGATGTC
TGTGTCAGTA ACAGCAACCG TCAGTTGCAT GCGCTCAGCA GTACGGTTGG CCAGTCGAAA
GTCGAGGTGA TGGCTGAGCG TATCCGTGCG ATCAACCCCG ATTGCATCGT GCACGCGGTG
GCTGATTTCG TCACCCGCGA CACCATGGCC GAGTGCATCA CCCCGGACAT GGACTTCGTC
ATCGACTGTA TCGACAGCGT CAACGCCAAG GCTGCGCTGA TTTCCTGGTG CAAACGACGC
AAGATTCAGA TGGTCACCAC CGGCGGGGCG GGCGGGCAGA TCGATCCGAC CCTGATTCAG
ATCGCCGACC TGAACCGCAC CTTCAATGAC CCGCTGGCCT CCAAGGTGCG TTCGACCCTG
CGTCGGGATT ATGGCTTTTC ACGCACGCCT AACCGTCACT ACAGCGTGCC TTGCGTGTTT
TCCACTGAAC AACTGCGCTA CCCCAAGCCG GATGGCAGTA TTTGTCTGGA AAAGAAATTC
GTCGGCGAGG GCGTAAAGCT CGATTGCGCC GGTGGTTTCG GTGCAGTGAT GATGGTGACT
GCGACCTTTG GCATGGTTGC CGCTACCCGT GCGGTAGACA AGCTGGTGGC GGGCACGCGA
CGGCCTTCGG AGCGGATCAA GCCAGCGCTT GTAACACCCG ATCAGGCTTG A
 
Protein sequence
MSAEDPRFAG IARLYGIEGL ARLRAAHVAV VGIGGVGSWA AEAMARSGVG EISLFDMDDV 
CVSNSNRQLH ALSSTVGQSK VEVMAERIRA INPDCIVHAV ADFVTRDTMA ECITPDMDFV
IDCIDSVNAK AALISWCKRR KIQMVTTGGA GGQIDPTLIQ IADLNRTFND PLASKVRSTL
RRDYGFSRTP NRHYSVPCVF STEQLRYPKP DGSICLEKKF VGEGVKLDCA GGFGAVMMVT
ATFGMVAATR AVDKLVAGTR RPSERIKPAL VTPDQA