| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1331 |
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| Symbol | |
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| ID | 3366826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1508611 |
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| End bp | 1509762 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637651670 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_234420 |
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| Protein GI | 66044579 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0263045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGCCC CAGCCGACCT CTCGCCCACC CTCCAACTCG CCTGCGATCT GATCCGCCGT
CCGTCAGTGA CGCCGGTCGA TGCCGATTGC CAGACCGTGA TGATGCAGCG CCTGGGCGAT
GCCGGCTTCA AGCTGGAGCC AATGCGTATC GAAGACGTCG ACAACTTCTG GGCCACCCAC
GGCACCACCG ACGGCCCGGT ACTGTGTTTC GCCGGGCATA CCGACGTGGT GCCGACCGGG
CCGCTGCAGA ACTGGCAGAA CGACCCGTTC GATGCGTTGA TCGACGAGCA CGGCATGCTC
TGCGGACGCG GCGCGGCAGA CATGAAAGGC AGTCTGGCGG CCATGCTGGT GGCGGCCGAA
CGCTTTGTCG CCGACCACCC TGATCACAAG GGCTCGGTAG CGTTCCTGAT CACCAGCGAC
GAAGAAGGCC CGGCGCATCA CGGCACCAAA GCCGTGGTCG AACGCCTCGC AGCGCGTAAC
GAGCGTCTGG ACTGGTGCAT CGTCGGCGAG CCGTCGAGCA CCACGCTGGT CGGCGATGTG
GTCAAGAACG GTCGGCGCGG TTCGCTGGGG GCCACGCTGA CAGTACGCGG CAAGCAGGGC
CATGTGGCTT ACCCGCATCT GGCGAAGAAT CCGATTCACC TGGCTGCGCC GGCCCTGGCC
GAACTGGCCG CCGAGCACTG GGACCACGGC AACGACTTCT TCCCGCCGAC CAGCTTCCAG
ATCTCCAACC TGAACGCTGG CACCGGCGCC ACCAATGTCA TCCCCGGCGA TCTGGTGGCG
GTCTTCAATT TCCGTTTTTC CACCGAGTCG ACCGTCGAAG GTCTGCAGCA GCGCGTTGCC
GATATCCTCG ACAGGCATGA ACTGGACTGG CACGTGGACT GGGCATTGTC CGGCCTGCCG
TTCCTCACCG AACCGGGCGC GTTGCTGGAC GCCGTGTCTT CCAGCATCAA AAGCGTCACC
GGCCGTGAGA CTAAAGCCTC GACCAGCGGC GGAACCTCCG ACGGTCGTTT CATCGCCACC
CTCGGCACCC AAGTGGTCGA GCTGGGGCCG GTCAACGCAA CGATCCATCA GGTCAACGAA
CGTATTCTGG CCAGCGACCT CGATGTGCTG ACCGAGATCT ACTACCAGAC TCTGGTCAAG
TTGCTCGCCT GA
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| Protein sequence | MTAPADLSPT LQLACDLIRR PSVTPVDADC QTVMMQRLGD AGFKLEPMRI EDVDNFWATH
GTTDGPVLCF AGHTDVVPTG PLQNWQNDPF DALIDEHGML CGRGAADMKG SLAAMLVAAE
RFVADHPDHK GSVAFLITSD EEGPAHHGTK AVVERLAARN ERLDWCIVGE PSSTTLVGDV
VKNGRRGSLG ATLTVRGKQG HVAYPHLAKN PIHLAAPALA ELAAEHWDHG NDFFPPTSFQ
ISNLNAGTGA TNVIPGDLVA VFNFRFSTES TVEGLQQRVA DILDRHELDW HVDWALSGLP
FLTEPGALLD AVSSSIKSVT GRETKASTSG GTSDGRFIAT LGTQVVELGP VNATIHQVNE
RILASDLDVL TEIYYQTLVK LLA
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