| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1325 |
|---|
| Symbol | |
|---|
| ID | 3366820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1502486 |
|---|
| End bp | 1503295 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637651664 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_234414 |
|---|
| Protein GI | 66044573 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0554428 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAGC AGCAAGCAGG CAGTCGTATC CGGGTCGAAG CCCTGGCCGT TGGCGGACAG
GAGCAGGCGG CGCAATGGGC GCAGCGCCTG GGCCTGCCGT TGACCGATGC GCACGCTGAT
TTTGCACTGC AGCTTACTGA CGAAGGGCTG CAGTTGCAGC AATTGGGCGA TGATGCGCCA
GGCGCGGTAC GTGTCGATTT TGTCGAGGGC GCAGTGGCTC ATCGGCGACT GTTCGGTGGT
GGGACCGGGC AGATGATTGC CAAGGCGGTC GGTATTCAGC CAGGCATTCG CCCCAGCGTG
CTGGATGCAA CGGCAGGGCT TGGCAAGGAT GCGTTCGTGC TGGCAAGTCT CGGTTGCGAC
ATGAGCCTGA TCGAGCGTCA GCCGATCATC GCTGCATTGC TGGAGGATGG TCTGGCCCGC
GGGCGCGGTG ATCGTGACGT CGGTTCGATC ATTGCCCGGA TGCGCCTGTT GACCGGCAAC
TCGATCGACC TCATCCGCGC CTGGACAGGG GAGCCGCCCC AGGTGATCTA CCTGGACCCG
ATGTTCCCGC ATCGGGAGAA GACCGCCCTG GTGAAAAAGG AAATGCGCCT GTTCCGGCCG
CTGGTCGGTG ATGACATGGA CGCGCCAGCC TTGCTGGAAG CCGCGCTGGC GCTTGCCACC
CACCGCGTGG TGGTCAAACG CCCGCGCAAG GCCCCCTGCA TCGACGGCCT TAAGCCGGGC
TATGCGCTGG ACGGCAAATC CAGCCGCTAC GACATTTACC CGAAGAAAGC CTTGAAGCCC
AAGGCAGCCA CAGACGAGAG CGGTGCATAG
|
|---|
| Protein sequence | MIEQQAGSRI RVEALAVGGQ EQAAQWAQRL GLPLTDAHAD FALQLTDEGL QLQQLGDDAP
GAVRVDFVEG AVAHRRLFGG GTGQMIAKAV GIQPGIRPSV LDATAGLGKD AFVLASLGCD
MSLIERQPII AALLEDGLAR GRGDRDVGSI IARMRLLTGN SIDLIRAWTG EPPQVIYLDP
MFPHREKTAL VKKEMRLFRP LVGDDMDAPA LLEAALALAT HRVVVKRPRK APCIDGLKPG
YALDGKSSRY DIYPKKALKP KAATDESGA
|
|---|
| |