Gene Psyr_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1322 
Symbol 
ID3366817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1500043 
End bp1500906 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content59% 
IMG OID637651661 
Producthypothetical protein 
Protein accessionYP_234411 
Protein GI66044570 
COG category[S] Function unknown 
COG ID[COG1801] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0505628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTCGTC TGCCTTACTA CCTCGGTTGT CCGTCATGGA GTGAAAACGC CTGGCGCGAT 
TCGCTGTACC CCGAAAATGC CCGCCCCAAT GATTTCCTGA ACCTCTACAC TCAGGTGTTC
AACGCTGTCG AAGGCAACAC CACGTTCTAT GCCCGTCCCG CCGCCACTAC GGTGCAGCGC
TGGGCAGAAA TAATGCCCGA CGATTTTCGC TTCACCGCCA AATTCCATAA AGACATCAGT
CACAACGGCG ACCTTCGTGA GCAGGTGGGC GCCGCTGAGG AATTCATTCG CCTGCTCGCG
CCTCTGGGCG GGCGGATCGC GCCGTTCTGG CTGCAGTTGC CGGCCAGCTT CACGCCCCCG
CGTCTGGCCG AGCTGGCCGG TTTTCTTGAC GAGCTCAAGG TGTCTGTAGC AGTGGAAGTG
CGCAACATGG CTTTCTTCAT GAAAGGTGAC GAAGAGCGCA TGCTCAATCG CCTGTTGCTG
GATCGAGGCG TCGAGCGCAT CTGCCTTGAT TCGCGGGCAT TGTTCAGCTG TGTCTCGAGT
GATCCTGCAG TCCTGCACGC CCAATCGAAA AAGCCCAAGG TGCCGCCTCG TCCGGCTTCG
CTGACGCTGT TTCCTCAAGT GCGCTTCATC GGCGGTCCGG ACCTTGAGGC CAACGATCAG
TTTCTGCTGC AGTGGGTGGA AAAGGTCGCC GTGTGGATTG AAGAGGGGCG CACGCCGTAT
GTCTTCCTGC ACACTCCGGA CAACATCAGG GCTGCCGAGC AGGCCATGCG CTTTCACCAG
CAACTGATGG CGCGATTGCC GGGCTTGCCG GCATTGTTCG AACTGGATCG CGGGCCTCAG
GTGGAACAGT TGGGCTTGCT CTGA
 
Protein sequence
MSRLPYYLGC PSWSENAWRD SLYPENARPN DFLNLYTQVF NAVEGNTTFY ARPAATTVQR 
WAEIMPDDFR FTAKFHKDIS HNGDLREQVG AAEEFIRLLA PLGGRIAPFW LQLPASFTPP
RLAELAGFLD ELKVSVAVEV RNMAFFMKGD EERMLNRLLL DRGVERICLD SRALFSCVSS
DPAVLHAQSK KPKVPPRPAS LTLFPQVRFI GGPDLEANDQ FLLQWVEKVA VWIEEGRTPY
VFLHTPDNIR AAEQAMRFHQ QLMARLPGLP ALFELDRGPQ VEQLGLL