Gene Psyr_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1314 
Symbol 
ID3366809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1492224 
End bp1493120 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content63% 
IMG OID637651653 
Productputative lipoprotein 
Protein accessionYP_234403 
Protein GI66044562 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00375724 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAACTGC TCGGCATCTT CACCCTGGTC CTTGCGCTCA CCGGCTGCAG TTCGATGTTG 
TTCTACCCCG AGCAAGGGGT TCCGTTCACG CCCGACAAGG CGCGCCTGCA GTATCAGGAC
GTGAACCTCA CTGCTGCCGA CGGTACGCGC CTGCACGGCT GGTGGTTGCC AGCGAAAGAA
GGCGTGCCGG TCAAGGGTAC GGTGCTGCAT CTGCACGGCA ACGGTGGCAA CCTGTCCTGG
CATCTTGGCG GCGTCTGGTG GCTGCCCGAG CAGGGTTATC AGGTGTTGAT GCTGGATTAC
CGTGGCTATG GCGAGTCGCA GGGCGAGCCG AGCCTGCCGG CGGTTTATCA GGATGTTCAG
GCCGCTTTCG ACTGGTTGAA CACTGCACCG CAAGTGCAAG GCAAACCGCT TGTGGTCCTG
GGGCAAAGCA TTGGCGGGGC GCTGGCGGTG CATTATCTTT CCGAACACCC GCAAGAGCGT
TCGCGGCTCA AGGCGCTGGT GCTGGACAGT GTGCCGGCCA GCTACCGCAG CGTCGCGCGA
AACTCGCTGA GCAAATCGTG GCTGACCTGG CCATTGAAAA CGCCCTTGTC CTGGCTGATC
CCGGAAGCCG ACAGCGCGGT CAACGGCCTG CCACGACTGG CCGGCACACC GATGCTGATC
TTTCACAGCA TGGACGACAC GCTGGTGCCG CTCGCCAACG GCATCGAGCT GTACAAGGCC
GCGCCTCCGC CGCGCGTATT GCAATTGACC CGTGGTGAAC ACGTGCAGAC GTTCGCAGAC
CCTCTCTGGC GTCAGGTGAT GCTGCGCTAT CTGGACGATC CGACGCATTT CAACGGTCTG
CGTCGCCTTG CGGAAGTGCC CAATTACCCG ACCCCCGCAA CACCGCCAGC GCAATGA
 
Protein sequence
MKLLGIFTLV LALTGCSSML FYPEQGVPFT PDKARLQYQD VNLTAADGTR LHGWWLPAKE 
GVPVKGTVLH LHGNGGNLSW HLGGVWWLPE QGYQVLMLDY RGYGESQGEP SLPAVYQDVQ
AAFDWLNTAP QVQGKPLVVL GQSIGGALAV HYLSEHPQER SRLKALVLDS VPASYRSVAR
NSLSKSWLTW PLKTPLSWLI PEADSAVNGL PRLAGTPMLI FHSMDDTLVP LANGIELYKA
APPPRVLQLT RGEHVQTFAD PLWRQVMLRY LDDPTHFNGL RRLAEVPNYP TPATPPAQ