| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1313 |
|---|
| Symbol | |
|---|
| ID | 3366808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1490743 |
|---|
| End bp | 1492020 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637651652 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_234402 |
|---|
| Protein GI | 66044561 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3930] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02421] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00134364 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGACGAGT ATCAACAGAC TATTCGTGCT TTATCGGATC GGATCGTCGT TGCACAGACG
CCGATTCGCA TTCTGGATGC AGTTAAATGG GATGAGAACG TCCGCAAGGA GTTTCTGGCC
GCCAAGGGCA AGGCGCTGCC TGCCGTGGAC CGCGCCTATT ACGAAAACCG TCCGCTGGGT
TTCGACTCTT CGGCCTTGAA GCAAGAGTTC CAGAACATCG AGCGGGACGT GACGCGTCAA
CTGGGTCAGT TCAACCCGGT CGGGCAGATC ATGCGCCGCA TGTGCCGTGA GTACCGCATG
GTGGTGCGTA TGCTTGAAGC GCGCGGCACG TCCGACTTCG GGCTGATTTC TCAGGAACTG
TACGGCGCGG CATCCGATGC CTTTCATGCG GGTGATCCGA CGCTGGCCGA TCTTGGCTTG
ATGCTCTCTG ATTACCTGAA CAACATTGCC GGGCGCGGCG ACCTGAAGGA CGAGCCGAAA
ACGCTCACCG CCAAGGACGC CGTTTCGCTG CTGCAATCGC GTTTGAACCG CGTGTTCGGT
GAGGCCGAGG AGACCATCCG GGTTTTCGAA TCCGACGGGA TCGTCGCCGA TGCGGCTGCC
GGTGCCGACT ACATCAAGAT CCGCACTGAC GCGATGTTCA ACGAGCGCGA TGTACGCGCG
CTCGAAGTTC ACGAAGGGCT GGTGCACGTG GGCACCACAC TGAACGGGCA AAACCAGCCG
ATCTGTACCT TCCTGTCCAA AGGCCCGCCA TCCTCGACGG TGACGCAGGA AGGCCTGGCG
ATTCTCATGG AAGTCATCGC CTTTGCATCC TATCCCAGCC GCCTGCGCAA GCTGACCAAT
CGCACACGGG CCATTCACAT GGCCGAGCAG GGTGCCGATT TTCTGCAGGT GTTCGAGTTT
TACCAGGAGC AGGGCTTCGG CATGTCCGAG AGCTACGGCA ATGCCAGTCG CGTTTTCCGC
GGCTCGGTGC CCAACGGCCT GCCGTTCACC AAGGACTTGT CCTACCTGAA GGGCTTCATC
ATGGTCTACA ACTACATTCA GCTCGCCGTG CGCAAGGGCA AGCTCGAACA GGTGCCGCTG
CTGTTCTGCG GCAAGACCAC CCTGGAAGAT ATGCGTACCC TGCGTCAACT GGTGGACGAA
GGGCTGGTGG TTGCACCCAA GTACCTGCCC GAGCAGTTCC GTGACATGAA CGCCTTGTCG
GCCTGGATGT GCTTCTCCAA CTTCCTCAAC CACCTGAGCC TGGACCGCAT CGAAGCGGAC
TACTCGAATA TTTTGTAG
|
|---|
| Protein sequence | MDEYQQTIRA LSDRIVVAQT PIRILDAVKW DENVRKEFLA AKGKALPAVD RAYYENRPLG
FDSSALKQEF QNIERDVTRQ LGQFNPVGQI MRRMCREYRM VVRMLEARGT SDFGLISQEL
YGAASDAFHA GDPTLADLGL MLSDYLNNIA GRGDLKDEPK TLTAKDAVSL LQSRLNRVFG
EAEETIRVFE SDGIVADAAA GADYIKIRTD AMFNERDVRA LEVHEGLVHV GTTLNGQNQP
ICTFLSKGPP SSTVTQEGLA ILMEVIAFAS YPSRLRKLTN RTRAIHMAEQ GADFLQVFEF
YQEQGFGMSE SYGNASRVFR GSVPNGLPFT KDLSYLKGFI MVYNYIQLAV RKGKLEQVPL
LFCGKTTLED MRTLRQLVDE GLVVAPKYLP EQFRDMNALS AWMCFSNFLN HLSLDRIEAD
YSNIL
|
|---|
| |