Gene Psyr_1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1310 
Symbol 
ID3366805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1487230 
End bp1488219 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content61% 
IMG OID637651649 
Productpeptide chain release factor 2 
Protein accessionYP_234399 
Protein GI66044558 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.496606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00990577 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACCGCG AGCTCGAAGA TCCAAACGTC TGGAACAACC CGGCCTACGC TCAGGAACTG 
GGGCGCGAGC GCTCCCTGCT GGCGCAGATC GTCGAAACCC TGGACGAAAT GTCCTCGGGT
CTGGCCGATG CCAAAGACCT GTTGCTGATG TCTGCCGAAG AAGAAGACCA GGCTGCCGTC
GATGACGTCG CTGCCGAAGT CGAGCGCCTG CGCGAATCGC TGGAAAAGCT CGAATTCCGC
CGCATGTTCA GCGGCGACAT GGACCCCAAC AACGCCTACC TGGACATCCA GGCCGGCTCC
GGCGGTACCG AAGCGCAGGA CTGGGCGAAC ATCCTGCTGC GCATGTACCT GCGCTGGGCC
GACAAGCGCG GTTTCGACGC CACCATCATG GAACTGTCCG CCGGTGAAGT CGCCGGTATC
AAGGGCGCTA CCGTGCACAT CAAGGGCGAG TACGCCTTCG GCTGGCTGCG TACCGAGATC
GGCGTTCATC GTCTGGTGCG CAAGAGCCCG TTCGACTCCG GCAACCGTCG CCACACCTCG
TTCTCGGCCG TGTTCGTTTC GCCGGAAATC GATGACAACA TCGAAATCGA CATCAACCCG
GCGGACCTGC GCATCGACAC CTACCGCTCC TCCGGTGCCG GTGGTCAGCA CGTAAACACC
ACTGACTCGG CGGTGCGTAT CACCCACGTT CCGACCAACA CCGTGGTCAG TTGCCAGAAC
GAGCGTTCCC AGCATGCGAA CAAGGACACC GCCATGAAAA TGCTGCGGGC CCGTTTGTAT
GAGCAGGAAG TGCAGAAGCG CAACGCGGCG TCCCAGGCGC TCGAAGACAC CAAGTCCGAT
ATCGGCTGGG GTCACCAGAT TCGCTCCTAC GTACTGGACG CCTCGCGTAT CAAGGACCTG
CGGACCAACA TCGAACGCAG CGACTGCGAC AAGGTGCTTG ATGGCGATAT CGACGAATAC
CTGATCGCGA GCCTCAAGCA AGGGCTGTAA
 
Protein sequence
MNRELEDPNV WNNPAYAQEL GRERSLLAQI VETLDEMSSG LADAKDLLLM SAEEEDQAAV 
DDVAAEVERL RESLEKLEFR RMFSGDMDPN NAYLDIQAGS GGTEAQDWAN ILLRMYLRWA
DKRGFDATIM ELSAGEVAGI KGATVHIKGE YAFGWLRTEI GVHRLVRKSP FDSGNRRHTS
FSAVFVSPEI DDNIEIDINP ADLRIDTYRS SGAGGQHVNT TDSAVRITHV PTNTVVSCQN
ERSQHANKDT AMKMLRARLY EQEVQKRNAA SQALEDTKSD IGWGHQIRSY VLDASRIKDL
RTNIERSDCD KVLDGDIDEY LIASLKQGL