Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1307 |
Symbol | |
ID | 3366802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1482580 |
End bp | 1484949 |
Gene Length | 2370 bp |
Protein Length | 789 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637651646 |
Product | response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt |
Protein accession | YP_234396 |
Protein GI | 66044555 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.105152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00575971 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGCCAG ATCAAATGCG TGACGCCTCG CTGTTCGAAC TGTTCACGCT GGAAGCCGAT GCGCAGACCC AGGTACTGAG TGCCGGCCTG CTGGCACTCG AACGTAACCC GACCCAGGCG GATCAGCTGG AAGCCTGCAT GCGTGCCGCT CATTCGCTCA AGGGCGCAGC GCGGATTGTC GGCGTCGATT TCGGCGTGAG CGTCGCGCAT GTGATGGAAG ATTGTCTGGT CAGCGCGCAG GAAGGGCGTC TGCTGCTTCA GGCCGAGCAT ATCGATGCGC TGCTGTCGGG GACCGACCTG TTGATGCGTA TCGCCACGCC TGGCGGCGAC AGCGTTGGTC AGCCTGATAT CGACAGTTAT GTCGAAAGGC TCAATACGTT GCTGGCTTCC GGTGCTGGCG CGGCGCGAAC GGTCAGTACG CCACTGCCGG ACCCGGCCTC GGACGCTTTA CTCGCCAGCG CGATGCTGCA GTTCGAGACG CCCAGCGCGG CAGTTGTGCC GGAGTCTGTG CCCGAGCCCT TGGCCGCAGA CTTGCCTGCG TCCGCCAATC CAGCCGCCAT GCCGGCTGCG GAACCTGAAG CACCGTTCAC GCCATTGCGT GAACGGCGTG TGGCCGAAGG TGGCGAGCGC GTGTTGCGAG TCACCGCCGA GCGCCTCAAC GGGCTGCTGG ACATGTCCAG CAAATCGCTG GTCGAGACTC AGCGACTCAA GCCGCTGCTG GCCGGTATGC AGCGGCTCAA GCGTCTGCAA AGCAGCAGTG ATCGTGCGCT TGAAGTGCTG GGCGCCAGCT TCGGCGAGGA AGGTCCTTCG GCTGATGTGC AAAAAGCCCT GGAAGACGCG CGTAGCCTCT TGTCCCAGGC GCAGCAGGTG TTGGTCCGGC ACACTGCCGA GCTGGATGAA TTCGGCTGGC AGTCGGCGCA ACGTGCGCAG TTGTTATACG ACACGGCACT GGCCTGCCGG ATGCGACCTT TCGCCGATGT GCTGAACGGC CAGGCGCGCA TGGTTCGCGA CCTGGGGCGT GAACTGGGCA AACAGGTCCG CTTGCAGATC GAAGGCGAGA AGACGCAGGT CGATCGCGAT GTGCTGGAAA AGCTCGATGC GCCATTGACC CATCTGTTGC GCAACGCCGT GGACCACGGC ATCGAATCGC CCGAGAAGCG CGTGGCGTCC GGCAAGGACC CTGAAGGTCT GATTCGTCTG CAGGCCTCGC ATCAGGCCGG CTTGCTGGTC GTCGAGTTGA GCGATGACGG TGGCGGTGTG GACCTTGAAC GTGTGCGCCA GAGCATCGTC GACCGCAAGC TTTCTCCTGC CGAGACCGCT GCGCAGTTGA GCGAGGAGGA ACTGCTGAGT TTCCTGTTCC TGCCGGGCTT CAGCATGCGC GACAAGGTCA CGCAGATTTC CGGCCGTGGT GTCGGCCTCG ATGCCGTGCA GCATATGGTT CGCCAGATGC ACGGCAGCGT CGAGCTGCAG CAATGGGCAG GCGAGGGCAG TCGCTTCAGG ATAGAAATGC CGCTGACGCT TTCAGTGGTA CGCAGCCTGG TCGTGGAAGT GGGCGGTGAA GCCTATGCCT TTCCGCTGGC GCATATCGAG CGCATGCGCG ACCTGCAGCC TGACGATATT CTGCAACTGG AAGGGCGTCA GCACTTCTGG GATGAAGAGC GGCATGTCGG TCTGGTTTCG GCCAGCCAGC TGTTGAACCG GCCACCCGCG CAGAAGGCCG GAGAAACGCT CAAGGTCGTG GTGATTCGCG AGCGCGATGC GGTTTATGGC GTGGCCGTCG AACGCTTCAT CGGTGAGCGT ACGCTGGTGG TGATGCCGCT CGATGCGCGC CTTGGCAAGG TCCAGGACGT GTCGGCAGGG GCCTTGCTCG ACGACGGTTC AGTGGTGTTG ATCATCGATG TCGAAGATAT GCTGCGCTCG GTGGAAAAAC TCCTGAATAC CGGCCGTCTG GAGCGCATCG ACCGGCGCGC TCGTCAGGCA GATCAGGTGT CACGCAAACG CGTGCTGGTC GTCGATGATT CTTTGACCGT TCGCGAGCTG GAACGCAAGC TGCTGGTCAG TCGCGGTTAC GAAGTATCGG TGGCCGTGGA CGGAATGGAT GGCTGGAATG CCCTGCGCGC CGAGGACTTC GACCTGCTGA TCACCGACAT CGACATGCCG CGTATGGACG GTATCGAACT GGTGACCCTG TTGCGCCGCG ATACCCGCTT GCAGTCCTTG CCGGTCATGG TCGTGTCCTA CAAGGACCGC GAAGAAGACC GGCGTCGCGG CCTGGACGCC GGCGCCGATT ATTACCTGGC CAAGGCCAGT TTCCACGATG ATGCCTTGCT CGACGCTGTC GTCGAATTGA TAGGAGACGC GCAAGGATGA
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Protein sequence | MTPDQMRDAS LFELFTLEAD AQTQVLSAGL LALERNPTQA DQLEACMRAA HSLKGAARIV GVDFGVSVAH VMEDCLVSAQ EGRLLLQAEH IDALLSGTDL LMRIATPGGD SVGQPDIDSY VERLNTLLAS GAGAARTVST PLPDPASDAL LASAMLQFET PSAAVVPESV PEPLAADLPA SANPAAMPAA EPEAPFTPLR ERRVAEGGER VLRVTAERLN GLLDMSSKSL VETQRLKPLL AGMQRLKRLQ SSSDRALEVL GASFGEEGPS ADVQKALEDA RSLLSQAQQV LVRHTAELDE FGWQSAQRAQ LLYDTALACR MRPFADVLNG QARMVRDLGR ELGKQVRLQI EGEKTQVDRD VLEKLDAPLT HLLRNAVDHG IESPEKRVAS GKDPEGLIRL QASHQAGLLV VELSDDGGGV DLERVRQSIV DRKLSPAETA AQLSEEELLS FLFLPGFSMR DKVTQISGRG VGLDAVQHMV RQMHGSVELQ QWAGEGSRFR IEMPLTLSVV RSLVVEVGGE AYAFPLAHIE RMRDLQPDDI LQLEGRQHFW DEERHVGLVS ASQLLNRPPA QKAGETLKVV VIRERDAVYG VAVERFIGER TLVVMPLDAR LGKVQDVSAG ALLDDGSVVL IIDVEDMLRS VEKLLNTGRL ERIDRRARQA DQVSRKRVLV VDDSLTVREL ERKLLVSRGY EVSVAVDGMD GWNALRAEDF DLLITDIDMP RMDGIELVTL LRRDTRLQSL PVMVVSYKDR EEDRRRGLDA GADYYLAKAS FHDDALLDAV VELIGDAQG
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