| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1303 |
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| Symbol | |
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| ID | 3366798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1478451 |
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| End bp | 1480073 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651642 |
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| Product | histidine kinase, HAMP region: chemotaxis sensory transducer |
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| Protein accession | YP_234392 |
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| Protein GI | 66044551 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00176405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAAGAACT GGACCTTGCG CCAACGGATT CTGGCGAGTT TCGCCGTCAT CATCGCAATC
ATGTTACTGA TGGTCGTTGT ATCTTATTCA CGGTTGTTGT CCATCGAGTC CAGCGAGGAA
GATGTGCGGC TTGATGCGTT GCCCGGCGTC TACTACAGCA CCCTGGTGCG CAGTGCCTGG
GGCGAGAGTT ACATCCGCAC GCTGGAGCTG ATTGCCGAAG GGCAGGGGCG GCCGCTGACC
AAGCAGGAAC GAGACCAGTT TCAGGGCTTT GACGAAAACC TGCAGGCACA GATGGACGGC
TACAAGAAGT CCATCTTCGA TGATACGGAC AGAGACAGCT TCGCGCTTTT CGAAAAGCGC
CGCGAGGCCT ATTCGCGCAT GCTCGCCGAT GTTCACGCCA AGTACGATCG CGGCGACTAC
GCAGGCGCGC GCGCCGAGTT CTATGGCGAA GTCAACCCGG TCTGGCTCGC GGGCCGCAAG
CAGCTCAATG ATCTTATCGT GGCCAACAAA CAGCTGGCGG ATCAGGCCAC CACCAATATC
GTCAATGCCG TGCTGGCTGC CAAGATCAGC ATGGTGCTCT CTCTGCTGAT CGCGGTCATG
GCCGCAGCGG CCTGCGGGCT GTTGTTGATG CGTTCGATCA TGGCACCGAT GCAACTGATC
GTGCGGATCC TGGACGTCAT GCGTACCGGC GACCTGAGCA CCCGCTTGAG CCTGTCCCGC
AAGGACGAGT TCAATGCCGT CGAGACCGGC TTCAACGACA TGGTCACCGA GCTCACCGCG
CTGGTTGCGC AGGCGCAGCG CTCTTCGGTA CAGGTCACCA CATCGGTGAC GGAAATCGCT
GCAACGTCCC GCCAGCAGCA GGCTACCGCC ACCGAGACCG CTGCAACCAC CACCGAGATC
GGCGCCACAT CGCGGGAAAT TGCCGCCACC TCGCGGGATC TGGTGCGGAC CATGACCGAA
GTCACCTCGG CGGCAGACCA GGCGTCGGTG CTCGCCGGCT CCGGCCAGCA GGGCCTGGCA
CGCATGGAAG ACACCATGCA TCAGGTGATG GGCGCTGCCA ATCTGGTCAA CGCCAAGCTG
GCGATCCTCA ACGAGAAGGC CGGCAACATC AATCAGGTCG TCGTCACTAT CGTCAAGGTC
GCCGACCAGA CCAACCTGCT GTCGCTCAAT GCCGCCATCG AGGCCGAGAA GGCCGGTGAG
TACGGTCGCG GGTTTGCAGT GGTTGCCACC GAGGTCCGTC GCCTCGCCGA CCAGACGGCT
GTCGCCACTT ATGACATCGA GCAAATGGTG CGTGAAATCC AGTCGGCGGT GTCTGCTGGG
GTGATGGGCA TGGACAAGTT TTCCGAAGAG GTGCGCCGCG GCATGTTCGA GGTCACGCAG
GTCGGCGAGC AATTGTCGCA GATCATCCAT CAGGTTCAGG CGTTGGCACC CCGTGTGCTG
ATGGTCAACG AAGGCATGCA GGCCCAGGCC ACCGGCGCCG AACAGATCAA CCAGGCGCTG
GTGCAACTGG CGGATGCCAG CAGCCAGACC GTCGAATCAC TGCGTCAAGC CAGTTTCGCC
ATCGACGAAT TGAGTCAGGT CGCGGTCGGG CTGCGCAGTG GCGTTTCGCG TTTCAAGGTC
TGA
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| Protein sequence | MKNWTLRQRI LASFAVIIAI MLLMVVVSYS RLLSIESSEE DVRLDALPGV YYSTLVRSAW
GESYIRTLEL IAEGQGRPLT KQERDQFQGF DENLQAQMDG YKKSIFDDTD RDSFALFEKR
REAYSRMLAD VHAKYDRGDY AGARAEFYGE VNPVWLAGRK QLNDLIVANK QLADQATTNI
VNAVLAAKIS MVLSLLIAVM AAAACGLLLM RSIMAPMQLI VRILDVMRTG DLSTRLSLSR
KDEFNAVETG FNDMVTELTA LVAQAQRSSV QVTTSVTEIA ATSRQQQATA TETAATTTEI
GATSREIAAT SRDLVRTMTE VTSAADQASV LAGSGQQGLA RMEDTMHQVM GAANLVNAKL
AILNEKAGNI NQVVVTIVKV ADQTNLLSLN AAIEAEKAGE YGRGFAVVAT EVRRLADQTA
VATYDIEQMV REIQSAVSAG VMGMDKFSEE VRRGMFEVTQ VGEQLSQIIH QVQALAPRVL
MVNEGMQAQA TGAEQINQAL VQLADASSQT VESLRQASFA IDELSQVAVG LRSGVSRFKV
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