| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1299 |
|---|
| Symbol | |
|---|
| ID | 3366794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1467821 |
|---|
| End bp | 1468927 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637651638 |
|---|
| Product | NADH:flavin oxidoreductase/NADH oxidase |
|---|
| Protein accession | YP_234388 |
|---|
| Protein GI | 66044547 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.203644 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGC TGCTTGAACC CTATACCCTG CGTCAATTGA CCCTTCGCAA TCGCATTGCC
GTATCGCCGA TGTGCCAGTA TTCCAGTGTC GACGGCCTGG CCAACGACTG GCACCTGGTT
CACCTGGGCA GTCGTGCTGT CGGCGGTGCC GGCCTGGTCA TCACCGAAGC AATGGCGGTG
ACGCCGGACG GCCGCATCAC TCCCGAAGAC CTCGGGCTGT GGAATGACGA GCAGATCGAA
CCGCTGCAAC GTATCACCCG CTTCATCAAC GCTCAGGGCG CGGTTGCCGG CGTCCAGCTG
GCGCATGCCG GCCGCAAGGC CAGCACCTGG CGCCCGTGGC TTGGCAAGCA CGGCAGTATC
TCCCTCAATG AAGGTGGCTG GACGCCGGTC GGGCCTTCGG CGATCGCCTT CGATCCGCAG
CACACTGCCC CTGTGCAATT GAGCGAGACG CAGATCCAGG AGTTGATCAA GGCGTTTGTC
GATTCCGCAC GGCGTGCCCT GGAGGCAGGC TTCAAAGTCG TGGAAATCCA CGCTGCCCAT
GGCTATTTGC TGCATCAGTT CCTGTCGCCC CTGAGCAACC AGCGCACCGA CGAGTATGGC
GGTTCATTCG AGAATCGCAT TCGCTTTACG CTGCAAGTCA CCGAAGCCGT GCGTGCGGTG
TGGCCTGCAG AGCTGCCAGT GTTCGTTCGC GTGTCCGCCA CCGACTGGGT GGAAGACGGC
TGGAACGCCG ATGAAACGGT CGAGCTGGCG CGTCGGTTGA AAGCCATCGG GACCGATCTG
ATCGATGTAT CGTCAGGCGG TACGTCAGCC AAGGCGGAAA TTCCGGTCGG CCCAGGCTAC
CAGACGCGCT TTGCCGAGCG GGTTCGCAAG GAGTCCGAGA TCGCAACGGG CACGGTGGGC
ATGATTACCG ATCCGGCGCA GGCAGAGCAC ATTCTGCGCA CCGGGCAGGC CGATATCATC
CTGCTGGCGC GTGAGCTGCT GCGTGATCCG TACTGGCCGC TGCGTGCCGA TGAAGACCTG
GGTGGGCGCC TGGCAACCTG GCCTGCGCAG TACCAGCGCG CCACACACCG TGATCAGCCG
ATTCATGAGT CAGATCTGCG CGACTGA
|
|---|
| Protein sequence | MSLLLEPYTL RQLTLRNRIA VSPMCQYSSV DGLANDWHLV HLGSRAVGGA GLVITEAMAV
TPDGRITPED LGLWNDEQIE PLQRITRFIN AQGAVAGVQL AHAGRKASTW RPWLGKHGSI
SLNEGGWTPV GPSAIAFDPQ HTAPVQLSET QIQELIKAFV DSARRALEAG FKVVEIHAAH
GYLLHQFLSP LSNQRTDEYG GSFENRIRFT LQVTEAVRAV WPAELPVFVR VSATDWVEDG
WNADETVELA RRLKAIGTDL IDVSSGGTSA KAEIPVGPGY QTRFAERVRK ESEIATGTVG
MITDPAQAEH ILRTGQADII LLARELLRDP YWPLRADEDL GGRLATWPAQ YQRATHRDQP
IHESDLRD
|
|---|
| |