| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1298 |
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| Symbol | |
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| ID | 3366793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1465993 |
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| End bp | 1467708 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637651637 |
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| Product | RecJ exonuclease |
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| Protein accession | YP_234387 |
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| Protein GI | 66044546 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.882929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.617769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCG AACCTCGTCC ATTGCCCGAC ACCTTGCCGT TCCTTGGCGA CCTGCCGCCC
TTGCTCACTC GTCTGTACGC AGCACGAGGT GTGGCCTGCG AGGCCGAACT GGACAAAAGC
CTGGCGCGGC TGATCCCCTA TCAGCAACTC AAGGGGATCG ATGCAGCGGT AGACCTGCTG
GTCACTGCGC TGCGCGAGGG CCAGCGCATG TTGATCGTCG GCGATTTCGA CGCCGATGGC
GCGACCGCCA GCACCGTGGG TGTTCTGGGA CTGCGTCTGC TGGGCGCAGT GCATGTGGAT
TATCTGGTGC CCAACCGGTT TGAATATGGC TACGGCCTTA CGCCGGAAAT CGTCGAAGTG
GCATTGCAGC GCGAACCTCA GCTGTTGATC ACCGTGGATA ACGGCATTTC GAGCGTCGAG
GGTGTAGCAG CGGCCAAGGC GGCCGGCTTG CAGGTACTGG TGACCGATCA CCATTTGCCT
GGGCATGAGC TTCCGGCTGC AGACGCCATC GTCAACCCGA ATCAGCCAGG CTGTACCTTT
CCCAGCAAGT CGCTGGCCGG TGTCGGGGTC ATTTTCTACG TACTGATGGC CTTGCGGGCG
CGTCTGCGCG AGACCGGCTG GTTCGAGAGC AATCAGCGTG CCCAGCCCAA TCTGGGCGAG
CTTCTGGATT TGGTCGCGCT GGGCAGTGTG GCCGATGTGG TGCCGCTGGA CGCCAACAAC
CGCATTCTGG TCCATCAGGG GCTGATGCGT ATCCGTGCCG GGCGTGCCAG ACCGGGGCTG
CGCGCCATTC TCGAAGTGGC ACGACGTGAA CCTTCGCGCA TCACCTCCAC CGACCTGGGG
TTCATTCTCG GGCCACGCCT GAACGCGGCA GGGCGCCTGG ATGACATGAG CCTGGGCATC
GAATGCCTGC TCTGCGACGA CCCGACACTG GCGCGGGAAA TGGCCGTGCA ACTGGATGAG
TTGAACCAGG ATCGCAAATC CATCGAGCAG GGCATGCAGC GTGAAGCACT CGCCCAGCTC
AAGGACCTGC CGCTGGAGTC GATGCCGTTT GGCCTCTGCC TGTTCGATGC CGAATGGCAC
CAGGGTGTCA TCGGCATCCT CGCTTCGCGT CTCAAGGAGC GTTACCACCG CCCGACCATC
GCGTTCGCCA GCGCCGGGGA GGGCGTGCTC AAAGGCTCGG CCCGCTCGGT GCCAGGGTTT
CACATTCGCG ACGCGCTGGA CGCCGTGGCG GCCAGTCATC CGCACCTGAT CAGCAAGTTC
GGCGGCCACG CGATGGCGGC AGGTCTTTCG CTGCCTGAAG AGAACTTCCC GGCATTTGCC
GCAGCGTTCG ACCAGGAGGT GCGTCGTCAG CTCGATGAGC AGGACCTGAC CGGGCGTTTG
CTGTCCGACG GCTCGCTGGC CGTCGAGGAG TTTCATCTGG AGCTGGCCCG TGCACTGCGC
AATGCCGGTC CCTGGGGGCA GCACTTCCCG GAGCCTTTGT TCCACGGCGT GTTTCAGCTG
GTCGAGCAAC GGGTGGTGGG CGAGCGTCAT TTGAAGATGG TGCTCAAGAC CGAATGCGGC
AGCGTCAAGC TCGATGGCAT TGCGTTCGGC GTCGACCGGG ATATCTGGCC CAATCCGAAT
ATCCGCTGGG TCGAGCTGGC CTACAAACTC GATCTCAACG AGTTTCGCGG TAACGAAACC
GTGCAATTGA TGGTGGTGCA TATCGCGCCA CGCTGA
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| Protein sequence | MRIEPRPLPD TLPFLGDLPP LLTRLYAARG VACEAELDKS LARLIPYQQL KGIDAAVDLL
VTALREGQRM LIVGDFDADG ATASTVGVLG LRLLGAVHVD YLVPNRFEYG YGLTPEIVEV
ALQREPQLLI TVDNGISSVE GVAAAKAAGL QVLVTDHHLP GHELPAADAI VNPNQPGCTF
PSKSLAGVGV IFYVLMALRA RLRETGWFES NQRAQPNLGE LLDLVALGSV ADVVPLDANN
RILVHQGLMR IRAGRARPGL RAILEVARRE PSRITSTDLG FILGPRLNAA GRLDDMSLGI
ECLLCDDPTL AREMAVQLDE LNQDRKSIEQ GMQREALAQL KDLPLESMPF GLCLFDAEWH
QGVIGILASR LKERYHRPTI AFASAGEGVL KGSARSVPGF HIRDALDAVA ASHPHLISKF
GGHAMAAGLS LPEENFPAFA AAFDQEVRRQ LDEQDLTGRL LSDGSLAVEE FHLELARALR
NAGPWGQHFP EPLFHGVFQL VEQRVVGERH LKMVLKTECG SVKLDGIAFG VDRDIWPNPN
IRWVELAYKL DLNEFRGNET VQLMVVHIAP R
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