Gene Psyr_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1289 
Symbol 
ID3366784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1453992 
End bp1454732 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content59% 
IMG OID637651628 
Productglutaredoxin 
Protein accessionYP_234378 
Protein GI66044537 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000448477 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.544286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTGC CACAGATTTT CGCTGCCGCG GCTTTGATGC TGGCCGGCAC CTTCAGTATG 
TCTGCCCTGG CTGATGCAGC CCCCGATCAG GCTATCCGCA AGACGCTCGA CTCGCTGGAA
TTGCAGCTGC CGGTCGAGAG TATCTCGCCG AGCCCGCTCA ATGGCCTCTA TGAAGTGAAG
CTCAAGGGCG GCCGCGTCCT GTACGCCAGC GCCGACGGTC AGTTCGTGGT TCAGGGCTAT
CTGTTTCAGG TGCAGAACGG CAAGCCGGTC AACCTGACCG AGAAGACCGA ACGTCTGGCC
ATTTCCAAGA CCATCAACGC CATTCCTGCG TCCGAGATGG TGATCTATCC GGCGGTGGGC
GAGACCAAGT CGCACATCAC CGTATTCACC GACACGACCT GCCCGTATTG CCACAAGCTG
CACGAAGAAG TCGGCCAGCT GAACAAGATG GGTGTCGAAG TCCGTTACCT GGCATTCCCG
CGTCAGGGGC TTGGTTCTCC GGGTGACGAG CAGTTGCAGG CCGTGTGGTG TTCCAAGGAT
CGCAAGGGCG CGATGGACCG TATGGTCGAT GGCAAGGACA TCAAGGCCGC CAAATGCGAC
AATCCGGTCA GCAAGCAATA TGAGCTCGGT CAGTCGATCG GCGTCAACGG CACGCCTGCG
ATTGTCCTCG CTGACGGTCA GGTGATTCCG GGTTATCAGC CTGCGGCTCA GGTTGCCAAG
CTGGCATTGA GCGCCAAATA A
 
Protein sequence
MRLPQIFAAA ALMLAGTFSM SALADAAPDQ AIRKTLDSLE LQLPVESISP SPLNGLYEVK 
LKGGRVLYAS ADGQFVVQGY LFQVQNGKPV NLTEKTERLA ISKTINAIPA SEMVIYPAVG
ETKSHITVFT DTTCPYCHKL HEEVGQLNKM GVEVRYLAFP RQGLGSPGDE QLQAVWCSKD
RKGAMDRMVD GKDIKAAKCD NPVSKQYELG QSIGVNGTPA IVLADGQVIP GYQPAAQVAK
LALSAK