| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1286 |
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| Symbol | xerD |
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| ID | 3366781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1451032 |
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| End bp | 1451928 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637651625 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_234375 |
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| Protein GI | 66044534 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0511461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCCA TCGACCACCC GCTGATTGAC CGGTTTCTGG ACGCGCTCTG GCTCGAGAAG
GGGCTGTCCG ACAACACCCG GGATGCTTAC CGCAGTGACC TGGCGCTGTT CAACGGCTGG
CTGCAGGAGC GCAACGTTGA TCTGATCAGT GCCGGGCGCG AAGTGATCCT CGATCATCTT
GCCTGGCGCG TGGACAATGC CTATAAGCCA CGCTCCACTG CGCGTTTTCT GTCCGGCGCA
CGTGGCTTCT ACCGCTACTT GCTGCGCGAA AAGCTGATTG CCGTTGATCC CACCCTGCAG
ATCGACATGC CTCAATTGGG CAAACCGTTG CCCAAATCGC TTTCCGAAGC TGACGTCGAA
GCATTGCTTG CTGCTCCCGA CCTGAGCGAG CCCATCGGCG AGCGTGACCG CGCCATGCTT
GAGGTGCTGT ATGCCTGCGG TCTGCGCGTG ACCGAATTGA TCAGCCTGAC CCTGGAACAG
GTCAACTTGC GCCAGGGCGT GCTGCGCGTG ATGGGCAAAG GCAGCAAGGA GCGACTGGTG
CCCATGGGCG AAGAGTCCAT CGTCTGGGTC GAGCGTTACC TGCGCGGTGC CCGCGACGAG
TTGCTGGGCG GAAAGCCCAG CGACGTCCTG TTCCCCAGCA CCCGTGGCGA CCAGATGACC
CGCCAGACCT TCTGGCACCG TATCAAGCAT CAGGCGACGG TTGCGGGCAT CGGCAAATCC
CTGTCACCGC ACACCCTGCG CCACGCCTTC GCCACCCATC TGCTCAATCA CGGCGCCGAC
TTGCGTGTGG TGCAGATGTT GCTCGGGCAC AGTGATCTCT CGACGACGCA GATCTACACC
CATGTGGCGC GTGCGCGATT GCAGGAGATG CATGCCAGGC ATCATCCGCG CGGTTAG
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| Protein sequence | MAAIDHPLID RFLDALWLEK GLSDNTRDAY RSDLALFNGW LQERNVDLIS AGREVILDHL
AWRVDNAYKP RSTARFLSGA RGFYRYLLRE KLIAVDPTLQ IDMPQLGKPL PKSLSEADVE
ALLAAPDLSE PIGERDRAML EVLYACGLRV TELISLTLEQ VNLRQGVLRV MGKGSKERLV
PMGEESIVWV ERYLRGARDE LLGGKPSDVL FPSTRGDQMT RQTFWHRIKH QATVAGIGKS
LSPHTLRHAF ATHLLNHGAD LRVVQMLLGH SDLSTTQIYT HVARARLQEM HARHHPRG
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