| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1284 |
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| Symbol | trmD |
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| ID | 3366779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1449781 |
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| End bp | 1450533 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637651623 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_234373 |
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| Protein GI | 66044532 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.556593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAGCC TGCGCATAGA AGTCATCAGT CTGTTTCCCG AGATGTTTTC CGCCATCAGC
GAATACGGCA TTACCAGCCG TGCGGTGAAA CAAGGGCTGT TGCAGCTCAC TTGTTGGAAT
CCGCGGGATT ACACCACTGA TCGCCATCAC ACTGTGGATG ATCGCCCATT TGGCGGTGGT
CCGGGCATGG TGATGAAGAT CAAGCCCCTT GAAGATGCTC TGGTTCAGGC CAGGCAAGCG
GCAGGGGATG CGGCGAAGGT GATTTACCTG TCGCCACAAG GCCGCCAGCT GAATCAGTCT
GCGGTACGCG AACTGGCGCA GGAGGAAGCG ATTATCCTCA TCGCCGGTCG TTATGAAGGC
ATTGACGAGC GTTTTATTGA TGCTCATGTC GATGAAGAGT GGTCGATTGG TGACTATGTT
CTTTCCGGTG GCGAGCTGCC GGCGATGGTC CTGATTGACG CGGTTACGCG GCTGCTGCCT
GGAGCTTTAG GGCATGTGGA CTCCGCGGAG GAAGATTCCT TCACGGACGG TCTGCTGGAT
TGCCCGCATT ACACCCGACC TGAGGTGTAT GCGGATCAGC GTGTTCCCGA CGTGTTGCTA
AGTGGCAATC ACGCGCACAT CCGGCGTTGG CGTTTACAGC AGTCCCTTGG GCGGACCTAT
GAACGACGCG CTGATCTTCT GGAAAGCCGC TCGCTTTCTG GAGAAGAGAA GAAGCTGCTG
GCGGAATACA TCCGCGAGCG GGACGATAGT TAA
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| Protein sequence | MASLRIEVIS LFPEMFSAIS EYGITSRAVK QGLLQLTCWN PRDYTTDRHH TVDDRPFGGG
PGMVMKIKPL EDALVQARQA AGDAAKVIYL SPQGRQLNQS AVRELAQEEA IILIAGRYEG
IDERFIDAHV DEEWSIGDYV LSGGELPAMV LIDAVTRLLP GALGHVDSAE EDSFTDGLLD
CPHYTRPEVY ADQRVPDVLL SGNHAHIRRW RLQQSLGRTY ERRADLLESR SLSGEEKKLL
AEYIRERDDS
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