Gene Psyr_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1277 
SymbolpurT 
ID3366772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1442343 
End bp1443524 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content62% 
IMG OID637651616 
Productphosphoribosylglycinamide formyltransferase 2 
Protein accessionYP_234366 
Protein GI66044525 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 
TIGRFAM ID[TIGR01142] phosphoribosylglycinamide formyltransferase 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.05935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAA TCGGAACTCC ACTGTCGCCC ACCGCGACGC GCGTACTGTT TTGCGGTAGC 
GGCGAACTGG GCAAGGAAGT CGTGATCGAG CTGCAGCGCC TAGGCGTTGA AGTGATCGCT
GTTGACCGTT ACGAGAACGC GCCAGCCATG CAGGTCGCTC ATCGCAGCCA TGTGATCAAC
ATGCTCGACG GTGCGGCACT GCGCGCAGTC ATCGAGGCCG AGAAGCCGCA CTTCATCGTT
CCGGAAATCG AAGCCATCGC CACCGCAACG CTGGTCGAGC TCGAGGCCGA AGGCTTCACC
GTGATCCCCA CCGCGCGCGC CGCGCAACTG ACCATGAACC GCGAAGGCAT TCGTCGTCTC
GCGGCTGAAG AGCTGAAGCT GCCGACCTCG CCTTACCACT TTGCCGACAC CTTCGAGGCG
TACAGCAAGG CGGTCGAAGA CCTCGGTTTC CCGTGTGTGG TCAAGCCGGT CATGAGCTCT
TCGGGCAAGG GGCAGAGCCT GCTCAAGAGC ACCGATGACG TGCAGAAAGC CTGGGATTAC
GCGCAAGAGG GTGGTCGCGC TGGTAAAGGG CGTGTCATCG TCGAAGGGTT CATCGACTTC
GATTACGAAA TCACCCTGCT GACCGTGCGT CACATCGGTG GCACCACATT CTGCGCGCCG
GTTGGGCATC GTCAGGAAAA GGGCGACTAT CAGGAGTCCT GGCAGCCGCA GGCCATGAGC
CCGGTTGCGC TGGCAGAGTC CGAGCGGGTT GCCAAGGCGG TGACCGAGGC ATTGGGTGGA
CGCGGGATGT TTGGCGTCGA ACTGTTCATC AAGGGCGATC AGGTGTGGTT CAGCGAAGTC
TCGCCGCGCC CGCACGACAC CGGTCTGGTG ACGCTGATTT CTCAGGACCT GTCGCAGTTT
GCCCTGCACG CGCGCGCGAT TCTGGGGCTG CCGATTCCGT TGATCCGTCA GTTCGGCCCT
TCGGCTTCGG CAGTGATCCT GGTCGAAGGC CAGTCCACGC AAACCGCTTT CGCCAACCTC
GGCGCTGCGC TGGCCGAGCC TGATACCGCA TTGCGTCTGT TCGGCAAGCC GGAAGTCAAC
GGTCAGCGGC GCATGGGCGT TGCCCTGGCG CGTGACGAGT CCATTGAAGC CGCTCGGGCC
AAAGCGACCC GGGCATCGCA GGCGGTAAAC GTAGAACTGT AG
 
Protein sequence
MTQIGTPLSP TATRVLFCGS GELGKEVVIE LQRLGVEVIA VDRYENAPAM QVAHRSHVIN 
MLDGAALRAV IEAEKPHFIV PEIEAIATAT LVELEAEGFT VIPTARAAQL TMNREGIRRL
AAEELKLPTS PYHFADTFEA YSKAVEDLGF PCVVKPVMSS SGKGQSLLKS TDDVQKAWDY
AQEGGRAGKG RVIVEGFIDF DYEITLLTVR HIGGTTFCAP VGHRQEKGDY QESWQPQAMS
PVALAESERV AKAVTEALGG RGMFGVELFI KGDQVWFSEV SPRPHDTGLV TLISQDLSQF
ALHARAILGL PIPLIRQFGP SASAVILVEG QSTQTAFANL GAALAEPDTA LRLFGKPEVN
GQRRMGVALA RDESIEAARA KATRASQAVN VEL