Gene Psyr_1272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1272 
Symbol 
ID3366767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1438297 
End bp1438848 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content59% 
IMG OID637651611 
ProductNUDIX hydrolase 
Protein accessionYP_234361 
Protein GI66044520 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT GCAGCCAGTG CGGCAACCCT GTTATCCAGC GCATTCCAGA AGGCGACAGC 
CGTTTGCGCT ATGTCTGCGA GCATTGCCAC ACCGTTCATT ACCAGAACCC GAACATCGTG
GCGGGCTGCC TGGTGACGCT GGGCGGCAAA GTGCTGCTGT GCCGCAGGGC GATAGAGCCG
CGCCTGGGTT TCTGGACGTT GCCGGCCGGC TTCATGGAGA ACGGCGAAAC CATCGAACAG
GCCGCACGGC GCGAAACCAT GGAGGAAGCC TGCGCCACCC TGAGCGAACT GCATCTGTAC
ACTTTGATCG ACGTGCCGCA TATCAATCAG GTGCATGTGT TCTATCGTGG GGAGATGGCG
AATGAGGCAT TCGCCGCAGG CATCGAGAGC CTGGAAGTGC AGTTATTCGA CGAAGCAGAC
ATTCCATGGT CGGACCTGGC TTTCATGACA GTCGGGCGTA CCCTAGAATA CTTCTTTGCG
GATCGGCGTC GGCAGGCCTA CCCGGTTCAT ACCAGCGCCC TTCCCCCGTC CCGTCCGTTG
CTGGACACCT GA
 
Protein sequence
MKFCSQCGNP VIQRIPEGDS RLRYVCEHCH TVHYQNPNIV AGCLVTLGGK VLLCRRAIEP 
RLGFWTLPAG FMENGETIEQ AARRETMEEA CATLSELHLY TLIDVPHINQ VHVFYRGEMA
NEAFAAGIES LEVQLFDEAD IPWSDLAFMT VGRTLEYFFA DRRRQAYPVH TSALPPSRPL
LDT