Gene Psyr_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1266 
Symbol 
ID3366761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1429748 
End bp1431121 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content62% 
IMG OID637651605 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_234355 
Protein GI66044514 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2132] Putative multicopper oxidases 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTTA CCCGTCGTCA AATCCTTACA GGCATCGCCG GTCTGGCCGT AGTCGGCCTT 
GGCGCGGGTG GTGCTTCGCG TTACTGGATG GGGCGTCGCG AGTCTGAAGC GGGCTCTGAC
TTCGTGCTGA TCGCCGCTCC GCTGGATGTG GAACTGGTGG CGGGCCACAA GACGCCAGCC
TGGGCCTTTG GCGGTTCTGC GCCGGGTACG GAGCTGCGCG TGCGGCAGGG TGAGTGGCTG
CGGCTGCGCT TCATCAATCA GTTGCCGGTC GAGACGACCA TTCATTGGCA TGGCATCAGG
TTGCCGCTGG AGATGGATGG CGTGCCGTAC GTGTCGCAGT TGCCGGTCAA GCCGGGTGAA
TACTTCGATT ACAAATTCCG TGTGCCGGAC GCGGGTAGCT ACTGGTACCA CCCGCACGTC
AGCAGCAGCG AAGAGCTGGG CCGCGGGCTG GTCGGGCCGC TGATTGTCGA AGAACGCGAG
CCGACCGGTT TTGCCTATGA GCGCACGGTC AGCCTGAAAA GCTGGCACGT GGACGAGCAG
GGCGCCTTTA CCGAGTTCAG TGTGTTGCGT GAAGCGGCAC GGGAGGGCAC GGCGGGGCGG
CTTTCAACGC TGAACGGTAT TCCGCAGGCG GTGATTGAGT TGCCTGCCGG GCAGATCACT
CGCGTGCGCT TGCTCAATCT CGACAATACC GTGACCTATC GACTCAATCT GCCGGACGCC
GAGGCGCAGA TCTATGCGCT GGATGGCAAC CCGGTCAAAC CGCGTCCCTT CGGCGACGAA
TACTGGCTGG GGCCGGGCAT GCGCATCTGT CTGGCGATCA AGGCCCCGCC GGCAGGCGAG
GAAATCTCGC TGCGTAACGG TCCGGTGCGC CTGGGGACGT TCCGCTCGGT CGCCAATAAC
GACGCGCCCG GCCAGTGGCC GCCCGAGCTG CCGGCCAATC CGGTGGCCGA GCCTGATATG
GCTAACGCCG AAAAGATCAA TTTCAACTTC GAGTGGGTGG GCTCGATGTC GGTCAACACC
GACAATGGCA AACCGCCCAG CCTGTGGCAG ATCAACGGCG AAGCGTGGGA CATTACCGAC
AAGACCTGCG CCGATCGGCC TATCGCCAGG TTGAAGCTGG GCAAGAGCTA TATCTTCGAG
TTGAAGAACA TGACTCAGTA TCAGCACCCG ATTCACTTGC ACGGCATGAG TTTCAAGGTA
ATCGCCTCCA ATCGGCGCAA GATCATCCCG TACTTCACCG ACACCTTTTT GCTGGGCCGT
AACGAACGGG CGCGAGTGGC GCTGGTGGCG GATAACCCCG GTGTATGGAT GTTCCATTGC
CACGTTATCG ATCACATGGA AACCGGCCTG ATGGCCGCCA TCGAGGTGGC ATGA
 
Protein sequence
MSFTRRQILT GIAGLAVVGL GAGGASRYWM GRRESEAGSD FVLIAAPLDV ELVAGHKTPA 
WAFGGSAPGT ELRVRQGEWL RLRFINQLPV ETTIHWHGIR LPLEMDGVPY VSQLPVKPGE
YFDYKFRVPD AGSYWYHPHV SSSEELGRGL VGPLIVEERE PTGFAYERTV SLKSWHVDEQ
GAFTEFSVLR EAAREGTAGR LSTLNGIPQA VIELPAGQIT RVRLLNLDNT VTYRLNLPDA
EAQIYALDGN PVKPRPFGDE YWLGPGMRIC LAIKAPPAGE EISLRNGPVR LGTFRSVANN
DAPGQWPPEL PANPVAEPDM ANAEKINFNF EWVGSMSVNT DNGKPPSLWQ INGEAWDITD
KTCADRPIAR LKLGKSYIFE LKNMTQYQHP IHLHGMSFKV IASNRRKIIP YFTDTFLLGR
NERARVALVA DNPGVWMFHC HVIDHMETGL MAAIEVA