Gene Psyr_1262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1262 
SymbolguaA 
ID3366757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1419709 
End bp1421286 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content61% 
IMG OID637651601 
ProductGMP synthase 
Protein accessionYP_234351 
Protein GI66044510 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0518] GMP synthase - Glutamine amidotransferase domain
[COG0519] GMP synthase, PP-ATPase domain/subunit 
TIGRFAM ID[TIGR00884] GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit
[TIGR00888] GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCG ACATTCACGC CCACCGTATC CTGATCCTCG ACTTCGGTTC CCAGTACACC 
CAGCTGATCG CCCGCCGCGT GCGCGAAATC GGCGTGTATT GCGAGCTGCA TCCGTTTGAC
ATGGACGACG AAGCGATTCG CGAATTCGCT CCAAAAGGCG TGGTCCTCGC CGGCGGCCCC
GAGTCCGTAC ACGAAGCCGA CAGCCCGCGC TGCCCGCAAG CGGTATTTGA CCTGGGTGTG
CCGGTTTTCG GTATCTGCTA CGGCATGCAG ACCATGGCCG AGCAGTTGGG CGGCAAGGTT
GCCGGTTCCG AGTTGCGCGA GTTCGGCTAC GCTCGCGTTG ACGTAGTTGG CAAAAGCCGT
CTGCTCGATG GTATCGAAGA CCATATCGAC GCCGACGGCC TGTTTGGCCT CGACGTATGG
ATGAGTCACG GTGACAAGGT CACCAAACTG CCGGAAAACT TCCACATTCT GGCCAGCACC
CCGAGCTGCC CGATTGCCGG TATGGCTGAC GACGCTCGCG GTTACTACGG CGTGCAGTTC
CACCCGGAAG TGACCCACAC CAAGCAGGGC GGTCGCATCC TGTCGCGCTT CATCCTCGAC
ATCTGCGGCT GTGAAGCACT GTGGACCCCT TCGAAGATTG CTGAAGACGC TATCGCTCAG
GTTCGCGCTC AGGTGGGTAC TGACAACGTG TTGCTGGGCC TGTCCGGCGG CGTTGACTCT
TCTGTCGTTG CCGCGTTGCT GCACAAGGCC ATCGGCGATC AACTGACCTG CGTATTCGTC
GACAACGGTC TGCTGCGCCT GCACGAAGGC GAACAGGTGA TGGCCATGTT CGCCGAGAAC
ATGGGCGTCA AGGTGATCCG CGCCAACGCC GAAGAGCAGT TCCTGAACAA CCTGGCAGGC
GAGAGCGATC CAGAGAAAAA GCGCAAGATC ATCGGCCGCA CCTTCATCGA CGTGTTCGAT
GCCGAGTCCT GCAAGCTGGA CAACATCAAG TACCTGGCGC AAGGCACCAT CTACCCTGAC
GTCATCGAGT CGGCTGGCGC GAAAAGCGGC AAGGCCCACG TCATCAAGTC GCACCACAAC
GTGGGCGGCC TGCCGGAAGA AATGAACCTC AAGCTGGTCG AGCCACTGCG CGAGCTGTTC
AAGGACGAAG TCCGCCGCCT GGGCCTCGAA CTCGGCCTGC CCTACGACAT GGTCTACCGC
CACCCATTCC CAGGCCCAGG CCTGGGCGTG CGCATCCTCG GCGAAGTGAA GAAGGAATAC
GCCGACCTCC TGCGTCGTGC CGACCACATC TTCATCGAAG AACTGCGCAA GGCCGACTGG
TACCACAAGG TCAGCCAGGC GTTCGTAGTG TTCCAGCCGG TCAAATCAGT CGGCGTCGTC
GGCGACGGCC GCCGCTACGC CTGGGTTGTC GCGTTGCGTG CGGTGGAAAC CATCGACTTC
ATGACCGCTC GCTGGGCGCA TCTGCCTTAT GAGCTGCTGG AGACGGTGAG CGGCCGGATC
ATCAACGAGA TCGAAGGGAT TTCGCGGGTG ACTTATGACG TGTCGAGCAA GCCGCCGGCT
ACTATTGAGT GGGAGTGA
 
Protein sequence
MALDIHAHRI LILDFGSQYT QLIARRVREI GVYCELHPFD MDDEAIREFA PKGVVLAGGP 
ESVHEADSPR CPQAVFDLGV PVFGICYGMQ TMAEQLGGKV AGSELREFGY ARVDVVGKSR
LLDGIEDHID ADGLFGLDVW MSHGDKVTKL PENFHILAST PSCPIAGMAD DARGYYGVQF
HPEVTHTKQG GRILSRFILD ICGCEALWTP SKIAEDAIAQ VRAQVGTDNV LLGLSGGVDS
SVVAALLHKA IGDQLTCVFV DNGLLRLHEG EQVMAMFAEN MGVKVIRANA EEQFLNNLAG
ESDPEKKRKI IGRTFIDVFD AESCKLDNIK YLAQGTIYPD VIESAGAKSG KAHVIKSHHN
VGGLPEEMNL KLVEPLRELF KDEVRRLGLE LGLPYDMVYR HPFPGPGLGV RILGEVKKEY
ADLLRRADHI FIEELRKADW YHKVSQAFVV FQPVKSVGVV GDGRRYAWVV ALRAVETIDF
MTARWAHLPY ELLETVSGRI INEIEGISRV TYDVSSKPPA TIEWE