Gene Psyr_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1254 
Symbol 
ID3366749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1410450 
End bp1411241 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content60% 
IMG OID637651593 
ProductNitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 
Protein accessionYP_234343 
Protein GI66044502 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATC TAAGCGGGCT GCCGAACCTC AACCTCGCGC TGATCCAGAC CACGCTGGCG 
TGGCATGATC GCGAGGCCAA TCTCGAGCAT TTCGAGCCAT TACTGGATGA GGCGTGCGGC
GCGGACCTGG TGATCCTGCC AGAGATGTTC ACCACCGGAT TCTCGATGGA GTCTGAGGCC
CTGTCAGAAC CGGAAGCCGG GCCTACATCA GTATGGCTAT TGGCTCAGGC CAAGCGTATC
AACGCCGTAG TGACCGGCAG CGTCATGATC CGCGCTGCCG AGGGCAGTCA TCGCAACCGC
TTGCTGTGGG CGCGACCGGA TGGTGCGCTG CTGCATTACG ACAAGCGCCA CCTGTTTCGC
ATGGCCGGAG AGCACGAGCA TTACACGCCG GGCGATCGCC AGGTCATGTT TGAACTCAAC
GGCTGGCGTG TACGGCCGCT GATCTGCTAT GACCTGCGCT TTCCGGTCTG GAGCCGTGAT
GCTCAGGACA CCGACCTGTT GCTGTACACC GCCAACTGGC CGGGTGCGCG GCGTCTGCAC
TGGAATCGCT TGCTGCCTGC CAGAGCCATT GAAAACCTGT GCTATGTGGC GGCAGTCAAC
CGGGTCGGAT CGGACGGCAA GGGCTTCGCT TACACTGGTG ACAGTCAGGT TCTGGATTTC
CAGGGCGAGA GCCTGTTGAG CGTGGGCGAA GCGGACGGAG TGTTCAAGGC GACGCTCAGC
GCGGCAGACT TGCATGCCTA TCGCACACGG TTTCCAGCCG GGCTGGATGC TGATTCATTT
AATATTGAAT AA
 
Protein sequence
MRDLSGLPNL NLALIQTTLA WHDREANLEH FEPLLDEACG ADLVILPEMF TTGFSMESEA 
LSEPEAGPTS VWLLAQAKRI NAVVTGSVMI RAAEGSHRNR LLWARPDGAL LHYDKRHLFR
MAGEHEHYTP GDRQVMFELN GWRVRPLICY DLRFPVWSRD AQDTDLLLYT ANWPGARRLH
WNRLLPARAI ENLCYVAAVN RVGSDGKGFA YTGDSQVLDF QGESLLSVGE ADGVFKATLS
AADLHAYRTR FPAGLDADSF NIE