Gene Psyr_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1253 
Symbol 
ID3366748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1409314 
End bp1410462 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content60% 
IMG OID637651592 
Productputative aminotransferase 
Protein accessionYP_234342 
Protein GI66044501 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGACA GCAAGTTGCC CAACGTGGGC ACCACTATCT TCACCGTCAT GTCACAGCTG 
GCCGCCGAAA CCGGGGCTAT CAACCTGTCC CAGGGGTTTC CCGATTTTGA CGGGCCGCAG
GCGCTGCGTG ATGCAGTCTG CCGACACGTC ACTCAAGGCC ATAACCAATA CTCACCGATG
ACCGGCCTGC CTGCGCTTCG TCAGCAAGTC GCGGCAAAGA TCGCCCGCAG CTATGGGCGT
ACGGTCAATC CGGACAGCGA AATCACCATC ACGCCGGGTG CCACGCAGGC GATTTTCTGC
GCGATCCACA GCGTTATTCG CGCTGGCGAC GAAGTGATCA TTTTCGACCC TTGCTATGAC
AGCTACGAGC CCGCCGTCGA ACTGGCCGGT GGGCGCTGCG TGCATGTGCA ACTGGGGCTG
GATGACTTCT CCATCGACTG GCAAAAGCTC AGCGATGCGC TAAGCCCGCG TACCCGCATG
ATCGTCATCA ACAGCCCGCA CAACCCCAGC GGCGCGTTGA TCAGCCGTGC AGAGCTCGAT
CGGCTGGCCG CGCTGATCGC CGATCGCGAC ATCTACCTGC TCAGCGACGA AGTCTATGAG
CACCTGGTGT TCGACGGCGC ACGCCATGTC AGTGTGCTTG ATCACGAAGC GTTGTATCAG
CGCGCCTTCG TCGTCAGCTC GTTCGGCAAG ACCTATCACG TCACTGGCTG GAAAACCGGC
TATGTGGTCG CGCCGCCAGC ATTGAGCGCC GAGTTGCGCA AGGTGCATCA GTATGTGAGC
TTCTGCGGTG TCACGCCTTT GCAGTACGCG TTGGCCGACT TCATGGCCGA ACACCCGGAG
CATGTCGATG AACTGCCAGG CTTTTATCAG GCCAAGCGCG ACTTTTTCTG TGGTCATCTG
GCCGAGTCGC GTTTCAGCTT CCGGCCGGTG GGCGGGACTT ATTTCCAGTT GGTCGATTAC
TCGCAGATCA GGCCCGACCT CAACGATGTC GACATGGCCT TGTGGATGAC CCGTGAACAC
GGTGTGGCGA GCATTCCGAT TTCTGTGTTC TACCAGAGCC CGCCAGCAGG GCAGCGCCTG
ATCCGCCTGT GCTTTGCCAA ACAGGAAGAG ACGTTGCGTC AGGCGGCGGA GAAACTATGC
GCGATCTAA
 
Protein sequence
MIDSKLPNVG TTIFTVMSQL AAETGAINLS QGFPDFDGPQ ALRDAVCRHV TQGHNQYSPM 
TGLPALRQQV AAKIARSYGR TVNPDSEITI TPGATQAIFC AIHSVIRAGD EVIIFDPCYD
SYEPAVELAG GRCVHVQLGL DDFSIDWQKL SDALSPRTRM IVINSPHNPS GALISRAELD
RLAALIADRD IYLLSDEVYE HLVFDGARHV SVLDHEALYQ RAFVVSSFGK TYHVTGWKTG
YVVAPPALSA ELRKVHQYVS FCGVTPLQYA LADFMAEHPE HVDELPGFYQ AKRDFFCGHL
AESRFSFRPV GGTYFQLVDY SQIRPDLNDV DMALWMTREH GVASIPISVF YQSPPAGQRL
IRLCFAKQEE TLRQAAEKLC AI