Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1253 |
Symbol | |
ID | 3366748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1409314 |
End bp | 1410462 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637651592 |
Product | putative aminotransferase |
Protein accession | YP_234342 |
Protein GI | 66044501 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACA GCAAGTTGCC CAACGTGGGC ACCACTATCT TCACCGTCAT GTCACAGCTG GCCGCCGAAA CCGGGGCTAT CAACCTGTCC CAGGGGTTTC CCGATTTTGA CGGGCCGCAG GCGCTGCGTG ATGCAGTCTG CCGACACGTC ACTCAAGGCC ATAACCAATA CTCACCGATG ACCGGCCTGC CTGCGCTTCG TCAGCAAGTC GCGGCAAAGA TCGCCCGCAG CTATGGGCGT ACGGTCAATC CGGACAGCGA AATCACCATC ACGCCGGGTG CCACGCAGGC GATTTTCTGC GCGATCCACA GCGTTATTCG CGCTGGCGAC GAAGTGATCA TTTTCGACCC TTGCTATGAC AGCTACGAGC CCGCCGTCGA ACTGGCCGGT GGGCGCTGCG TGCATGTGCA ACTGGGGCTG GATGACTTCT CCATCGACTG GCAAAAGCTC AGCGATGCGC TAAGCCCGCG TACCCGCATG ATCGTCATCA ACAGCCCGCA CAACCCCAGC GGCGCGTTGA TCAGCCGTGC AGAGCTCGAT CGGCTGGCCG CGCTGATCGC CGATCGCGAC ATCTACCTGC TCAGCGACGA AGTCTATGAG CACCTGGTGT TCGACGGCGC ACGCCATGTC AGTGTGCTTG ATCACGAAGC GTTGTATCAG CGCGCCTTCG TCGTCAGCTC GTTCGGCAAG ACCTATCACG TCACTGGCTG GAAAACCGGC TATGTGGTCG CGCCGCCAGC ATTGAGCGCC GAGTTGCGCA AGGTGCATCA GTATGTGAGC TTCTGCGGTG TCACGCCTTT GCAGTACGCG TTGGCCGACT TCATGGCCGA ACACCCGGAG CATGTCGATG AACTGCCAGG CTTTTATCAG GCCAAGCGCG ACTTTTTCTG TGGTCATCTG GCCGAGTCGC GTTTCAGCTT CCGGCCGGTG GGCGGGACTT ATTTCCAGTT GGTCGATTAC TCGCAGATCA GGCCCGACCT CAACGATGTC GACATGGCCT TGTGGATGAC CCGTGAACAC GGTGTGGCGA GCATTCCGAT TTCTGTGTTC TACCAGAGCC CGCCAGCAGG GCAGCGCCTG ATCCGCCTGT GCTTTGCCAA ACAGGAAGAG ACGTTGCGTC AGGCGGCGGA GAAACTATGC GCGATCTAA
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Protein sequence | MIDSKLPNVG TTIFTVMSQL AAETGAINLS QGFPDFDGPQ ALRDAVCRHV TQGHNQYSPM TGLPALRQQV AAKIARSYGR TVNPDSEITI TPGATQAIFC AIHSVIRAGD EVIIFDPCYD SYEPAVELAG GRCVHVQLGL DDFSIDWQKL SDALSPRTRM IVINSPHNPS GALISRAELD RLAALIADRD IYLLSDEVYE HLVFDGARHV SVLDHEALYQ RAFVVSSFGK TYHVTGWKTG YVVAPPALSA ELRKVHQYVS FCGVTPLQYA LADFMAEHPE HVDELPGFYQ AKRDFFCGHL AESRFSFRPV GGTYFQLVDY SQIRPDLNDV DMALWMTREH GVASIPISVF YQSPPAGQRL IRLCFAKQEE TLRQAAEKLC AI
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