Gene Psyr_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1247 
Symbol 
ID3366742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1402337 
End bp1403341 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content62% 
IMG OID637651586 
Producthypothetical protein 
Protein accessionYP_234336 
Protein GI66044495 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.235663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGG CGCATCCCGA AGTTGTAGCA ACCAATCGCG TGAATCCTGG AGAAACCCTG 
CGCCAGGCCC GCGAGAGCAG GAGCTGGTCG CTGCCAGATG TGGCCTTGAG ATTGAATCTC
ACCGTGACCT CCCTGACCAA TCTGGAGAAC GGCCAGTTTG AAAAGCTGCC TGGGCATACG
TTTGCCCGGG GTTATGTGCG TGCCTACGCC AAACTGCTTG ACCTTGATCA GGCGGCGCTG
GTCGAGCAGT TCGACCAGTT CACCGGCACC GACGGTAAAG GCAGTTCGGT TCACGCGCTG
GGCCGTATCG AAGAGCCGGT CAGGCTGTCG CACAATATTC TGCGTATCGT CAGCCTGCTG
TTGCTGGTGA TTCTGGTCGG CGGCGGTTTC TTCTGGTGGC AGGATCAGGC GACCTTGCGC
GGCAAGGATC AGTCCGGGCT GAACATGGAG CACGTCGAAG TCGAAAGCGC GGATGGCACC
ACGCAGATTC ACCCGCTTGA CGAACCGGAA GAGCCTGCTG TAGCTGAAAC GCCTGCCTCT
GGACAAACTT CCTTGCCGTT GAATACCGGT GCGCCTGCCA GTGAGGCGCC CGCTGCTGCG
CCTGCGGCCC CGGCTTCCAG CGTCACAGGT CACGCAACCG CACAACCACA GACACCTGCT
GCTGCCACGC CACCGGCGAG CGCGCCTCAA GCACCCGTTG CTGCGCCGAA CGTGCCGTCG
ATGCCGACTG CACCTGCCGA GCAGCCAGCG CCTGTTGTGG CGGGTGCCGG TCAGGTGACC
GTACAGTTCG TCGCCGATTG CTGGACCCAG GTCACTGACG GAAACGGCAA AGTGCTGGTC
AGCGGTCTCA AGCGCAAGGG CGAGAGCCTG GATGTCAACG GCAAGCCGCC GTTGACCCTG
CGTCTGGGCT ACGCGCGCGG TGCGCAGGTC AGCTACAACG GTCAGCCTGT GGATGTAGCA
CCTTTTACCA GCGGCGAAAC TGCTCGCCTG AAGCTAGGGC AATAA
 
Protein sequence
MKAAHPEVVA TNRVNPGETL RQARESRSWS LPDVALRLNL TVTSLTNLEN GQFEKLPGHT 
FARGYVRAYA KLLDLDQAAL VEQFDQFTGT DGKGSSVHAL GRIEEPVRLS HNILRIVSLL
LLVILVGGGF FWWQDQATLR GKDQSGLNME HVEVESADGT TQIHPLDEPE EPAVAETPAS
GQTSLPLNTG APASEAPAAA PAAPASSVTG HATAQPQTPA AATPPASAPQ APVAAPNVPS
MPTAPAEQPA PVVAGAGQVT VQFVADCWTQ VTDGNGKVLV SGLKRKGESL DVNGKPPLTL
RLGYARGAQV SYNGQPVDVA PFTSGETARL KLGQ