| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1246 |
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| Symbol | |
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| ID | 3366741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1401579 |
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| End bp | 1402337 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637651585 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_234335 |
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| Protein GI | 66044494 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | [TIGR02521] type IV pilus biogenesis/stability protein PilW |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.619631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTGC GTGCCTCGCT GCTGCTCTGT GTTGTCGTCT TGCTGACAGC GTGCGTGTCC
ACCGGCAACG TCAACCCGCT GACGACGGCC CAGGGGCGCG AGGAAGCGCG CAAGGCTTAC
GTGCAGCTCG GGCTGGGTTA CTTTCAGCAG GGGCAGACCG AGCGAGCCAA GGTTCCGCTG
AAAAAGGCGC TCGAGCTCGA CAGTTCCGAT GCGCAGGCCA ACGCCGCGCT GGCCCTGGTG
TTCCAGACAG AGATGGAGCC GGAGCTGGCA GAGCAGTACT TTCGCAAGGC GTTGGCTGCC
AGCAATAACG AAACACGCAT CGTCAACAAT TACGGCAGTT TTCTTTTCGA ACAAAAGCGC
TACAAGGAAG CCTACGAGCG TTTTGAACAG GCGGCTGCCG ACAACCTGTA TCCTGAGCGG
TCACGGGTTT TTGAAAGCCT GGGCATGACC TCGCTGAAAC TGGGCAACCG CGAGCAGGCT
CGCGAGCATT TTACCAAGGC ATTGCGCCTG GACCGTCAGT TGCCGTTATC CTTGCTGGAA
ATGGCTCAGC TGTCCTACGA AGACAAGCAA TATGTGCCGG CGCGTGACTA TTACGACCGT
TTTAGCCAGC TCAGCGAGCA AAATGCACGT AGTCTATTGC TCGGTACGCG GCTGGCGAAG
ATATATGATG ATCGTAACAA GGCGGCCAGC TTTGGCCTGC TGTTGAAAAG ACTCTATCCC
GGTACGCCGG AATATCAGCA ATACCTGTCG GAGCAATGA
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| Protein sequence | MPVRASLLLC VVVLLTACVS TGNVNPLTTA QGREEARKAY VQLGLGYFQQ GQTERAKVPL
KKALELDSSD AQANAALALV FQTEMEPELA EQYFRKALAA SNNETRIVNN YGSFLFEQKR
YKEAYERFEQ AAADNLYPER SRVFESLGMT SLKLGNREQA REHFTKALRL DRQLPLSLLE
MAQLSYEDKQ YVPARDYYDR FSQLSEQNAR SLLLGTRLAK IYDDRNKAAS FGLLLKRLYP
GTPEYQQYLS EQ
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