Gene Psyr_1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1245 
Symbol 
ID3366740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1400404 
End bp1401552 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content58% 
IMG OID637651584 
Producthypothetical protein 
Protein accessionYP_234334 
Protein GI66044493 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCAT CGACTGGTAA AACCAACCTG CTGGGGCTGA CTCAACAGGA AATGGAGAAA 
TTCTTCGACT CTATCGGGGA GAAGCGCTTC CGTGCCGGTC AGGTCATGAA GTGGATTCAC
CACTTCGGCG TCGACGATTT CGACGCGATG ACGAACGTCA GCAAGGCCCT GCGCGAAAAG
CTCAAGGCCT GTGCTGAGGT TCGCGGTCCT GAAGTGGTCA GCGAGGACAT CTCCAGCGAC
GGCACCCGTA AATGGGTGGT GCGCGTAGAG TCCGGCAGCT GTGTCGAGAC CGTCTATATT
CCGCAGGGCA AGCGCGGCAC CTTGTGTGTT TCGTCCCAGG CGGGCTGTGC CCTGGATTGC
AGTTTCTGCT CCACGGGCAA GCAAGGCTTC AACAGCAACC TCACCGCCGC CGAAGTCATC
GGTCAGGTGT GGATTGCCAA CAAATCCTTT GGCAGCGTCC CGGCGACCGT CGACCGTGCC
ATCACCAACG TGGTGATGAT GGGCATGGGT GAGCCGCTGC TGAACTTCGA CAATGTCATT
GCCGCCATGC ATCTGATGAT GGATGACCTG GGGTATGGCA TTTCCAAGCG CCGGGTGACC
TTGTCTACTT CCGGTGTGGT ACCGATGATC GATGAGCTTT CCAAGCACAT CGACGTGTCC
CTGGCCTTGT CGCTGCACGC ACCGAACGAT GCGCTGCGCA ACCAGCTGGT GCCGATCAAC
AAGAAATACC CGTTGAAAAT GCTTCTCGAG TCCTGCCGTC GCTACATGTC CAGTCTGGGC
GAAAAGCGTG TGCTCACCAT CGAGTACACC ATGCTCAAGG ACATCAACGA CAAGGTAGAG
CACGCGGTCG AGATGATCGA ACTGCTCAAG GACACGCCTT GCAAGATCAA CCTGATCCCG
TTCAACCCAT TTCCGCACTC CGGTTACGAG CGTCCCAGCA ATAACGCGAT ACGTCGTTTT
CAGGACCTGT TGCATCAGGC CGGTTATAAC GTCACTGTGC GCACCACGCG TGGTGAAGAC
ATCGATGCTG CATGCGGCCA GTTGGTCGGG CAGGTGATGG ACCGCACACG CCGTAGCGAA
CGCTATATAG CCGTGCGTGA GTTGAGCGCC GAGGCCGATG CGGCCCCTGT CGCGGTGACT
CGAACCTGA
 
Protein sequence
MIASTGKTNL LGLTQQEMEK FFDSIGEKRF RAGQVMKWIH HFGVDDFDAM TNVSKALREK 
LKACAEVRGP EVVSEDISSD GTRKWVVRVE SGSCVETVYI PQGKRGTLCV SSQAGCALDC
SFCSTGKQGF NSNLTAAEVI GQVWIANKSF GSVPATVDRA ITNVVMMGMG EPLLNFDNVI
AAMHLMMDDL GYGISKRRVT LSTSGVVPMI DELSKHIDVS LALSLHAPND ALRNQLVPIN
KKYPLKMLLE SCRRYMSSLG EKRVLTIEYT MLKDINDKVE HAVEMIELLK DTPCKINLIP
FNPFPHSGYE RPSNNAIRRF QDLLHQAGYN VTVRTTRGED IDAACGQLVG QVMDRTRRSE
RYIAVRELSA EADAAPVAVT RT