| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1236 |
|---|
| Symbol | |
|---|
| ID | 3366731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 1394236 |
|---|
| End bp | 1394727 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637651575 |
|---|
| Product | transcription factor IscR |
|---|
| Protein accession | YP_234325 |
|---|
| Protein GI | 66044484 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator)
[TIGR02010] iron-sulfur cluster assembly transcription factor IscR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.507944 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTGA CTACTAAAGG CCGATACGCT GTAACAGCCA TGCTTGACCT GGCGTTGCAT
GCGCAGAACG GGCCAGTGTC TCTGGCCGAC ATCTCCGAGC GGCAGGGTAT TTCCCTGTCC
TACCTCGAGC AGCTGTTCGC CAAGCTGCGT CGCGGCAATC TGGTTTCCAG TGTTCGTGGT
CCGGGTGGTG GTTACCAGCT GTCGCGCGAC ATGAAAGGCA TCCAGGTTGC TCAGGTTGTC
GATGCAGTCA ATGAATCGGT CGATGCTACG CGGTGTCAGG GTCTGGGCGA TTGCCACGCC
GGCGATACCT GCCTGACCCA TCACTTGTGG TGCGACCTGA GCCAGCAGAT TCACGAATTT
CTAAGCGGTA TCAGCTTGGC GGATCTTGTC ACTCGCCGTG AGGTACAAGA AGTCGCTCAG
CGCCAGGATA TGCGCCGTGG TCATAATCAC ATGTCGCAAC TGGGTAAGAT CGAAACGTCC
GCCGTCGAAT GA
|
|---|
| Protein sequence | MRLTTKGRYA VTAMLDLALH AQNGPVSLAD ISERQGISLS YLEQLFAKLR RGNLVSSVRG
PGGGYQLSRD MKGIQVAQVV DAVNESVDAT RCQGLGDCHA GDTCLTHHLW CDLSQQIHEF
LSGISLADLV TRREVQEVAQ RQDMRRGHNH MSQLGKIETS AVE
|
|---|
| |