Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1234 |
Symbol | |
ID | 3366729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1392536 |
End bp | 1393300 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637651573 |
Product | RNA methyltransferase TrmH, group 1 |
Protein accession | YP_234323 |
Protein GI | 66044482 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0565] rRNA methylase |
TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.600347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTGCAGA ACATTCGTGT TGTCCTGGTC GGCACTACCC ATCCCGGAAA TATCGGCGGG GCGGCTCGCG CCATGAAAAA CATGGGGCTT TCGCGTCTGG TGCTGGTCGA TCCGCGGATC TTCCCTTCGC CCGATGCCGA TGCGCGTGCG TCCGGCGCTA CCGACATCCT CGAGGGCGCG CAGGTGGTGG CGACCCTCGA AGAAGCGCTG GTCGGCTGCC GTCTGGTGCT GGGCACCAGC GCGCGGGATC GAAGCCTGCC TTGGCCCATG CTGGATCCGC GCGCCTCGGG TGAAAAAGTC ATCGAGCAGG CCGGTGAGGG CGCCGAGGTG GCACTGGTGT TCGGTCGTGA GCACGCGGGC TTGACCAACG AAGAGCTGCA GCGCTGCCAC TTCCATGTGC ACATCCCGTC TGACCCTGCG TTCAGTTCGC TCAATCTGGC GGCTGCCGTA CAGGTGCTCA GTTATGAGGT GCGCGTAGCC TGGCTGGCTG CGGCGGAGCA AGGCGAGGCT TCAAGACCCG CGTCGGCGCA CAATGCCGAG CTGGCGACGA TGGACGAAAT GGAAGGTTTC TACACCCATC TTGAGGCCAC GCTTGTGGCC ATCGGCTTTC TTGATCCGGA AAAGCCGCGG CATCTGATGG CCCGGCTGCG CAGACTGTAC GGGCGTAGCG AAGTCGAACG TTCCGAGCTG AGTATCCTGC GCGGTGTGCT CACCGAAACC CAGAAAGCCG CACGCGGTGA ACCCTACAAG CGAAAGGATC AGTGA
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Protein sequence | MLQNIRVVLV GTTHPGNIGG AARAMKNMGL SRLVLVDPRI FPSPDADARA SGATDILEGA QVVATLEEAL VGCRLVLGTS ARDRSLPWPM LDPRASGEKV IEQAGEGAEV ALVFGREHAG LTNEELQRCH FHVHIPSDPA FSSLNLAAAV QVLSYEVRVA WLAAAEQGEA SRPASAHNAE LATMDEMEGF YTHLEATLVA IGFLDPEKPR HLMARLRRLY GRSEVERSEL SILRGVLTET QKAARGEPYK RKDQ
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