| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1213 |
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| Symbol | HrcN |
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| ID | 3366707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1369057 |
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| End bp | 1370406 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637651554 |
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| Product | type III secretion cytoplasmic ATPase HrcN |
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| Protein accession | YP_234305 |
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| Protein GI | 66044464 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
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| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.66508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.984942 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATGCAG CACTGAACCT GTGGAAAGAC GCCCACGCCA GGCGTTTGAG CGAGTACTGC
GCGGTGCGCG TCATTGGCCG GGTCAGCGCC GTGCGCGGGA TTCTGCTGGA GTGCAAGATT
CCGTCGGCCA AGGTCGGCGA TCTCTGTGAA GTGAGCAAAG CCGACGGCTC GTTGCTGCTG
GCCGAAATCG TCGGCTTCAC CCAGGAATGC ACGCTGCTCA GTGCCTTGGG CCCACCCGAC
GGTATTCAGG TCGGCGCGCC GATCCGCCCG CTGGGCGTGG CACACCGGAT CGGCGTCGAT
GACAGCCTGC TCGGCTGTGT ACTGGACGGT TTCGGGCGCC CGCTGATGGG CGATTGCCTC
GGTGCTTTCG CCGGCCCCGA GGACCGCCGC ACGACGCTGC CGGTGATCGC CGACGCCCTG
CCGCCGACCC AGCGACCGCG TATCACCCGG GCGTTACCCA CCGGGATACG CGCCATCGAC
AGTGCGATTC TGCTCGGCGA GGGCCAGCGT GTCGGGCTGT TCGCCGGTGC GGGCTGCGGC
AAGACCACGC TGATGGCCGA ACTGGCGCGC AACATGGATT GTGACGTCAT CGTTTTCGGC
CTGATCGGCG AACGGGGCCG CGAGCTGCGC GAGTTTCTCG ACCATGAACT GGATGAAACC
CTGCGCCGCC GCTCGGTGCT GGTCTGTGCG ACATCCGATC GTTCCAGCAT GGAGCGCGCC
CGCGCTGCGT TCACCGCGAC CGCCATTGCC GAAGCCTTTC GCGCCCGCGG CCAGAAAGTG
TTGTTGCTGC TCGACTCGCT GACCCGCTTC GCCCGCGCGC AACGGGAAAT CGGCATTGCC
TCGGGCGAGC CGCTGGGGCG CGGCGGTCTG CCGCCCTCGG TGTACACCCT GCTGCCACGC
CTGGTGGAAC GCGCCGGGAT GAGCGAAAAC GGTTCGATCA CCGCGCTTTA CACGGTACTG
ATCGAACAGG ACTCGATGAA CGATCCGGTC GCCGACGAAG TGCGCTCGTT GCTCGACGGG
CACATCGTAC TGTCGCGCAA ACTGGCTGAA CGCGGGCACT ACCCGGCGAT CGATGTGTCG
GCCAGCATCA GCCGGATCCT GAGCAACGTC ACCGGTCGCG AACATCAACG GGCGAACAAT
CGCCTGCGTC AGTTGCTGGC CGCCTATAAA CAAGTGGAAA TGCTCCTGCG CCTGGGCGAA
TACCAGGCCG GGGCCGACCC GGTCACCGAC TGTGCCGTGC AACTGAACGA GGCTATAAAC
GCGTTCCTGC GCCAGGACCT GCGTGAGCCC GTGCCGTTGC AGGAAACCCT CGACAGGCTG
CTGCAACTCA CCTCTCAACT GCCGGAGTAG
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| Protein sequence | MNAALNLWKD AHARRLSEYC AVRVIGRVSA VRGILLECKI PSAKVGDLCE VSKADGSLLL
AEIVGFTQEC TLLSALGPPD GIQVGAPIRP LGVAHRIGVD DSLLGCVLDG FGRPLMGDCL
GAFAGPEDRR TTLPVIADAL PPTQRPRITR ALPTGIRAID SAILLGEGQR VGLFAGAGCG
KTTLMAELAR NMDCDVIVFG LIGERGRELR EFLDHELDET LRRRSVLVCA TSDRSSMERA
RAAFTATAIA EAFRARGQKV LLLLDSLTRF ARAQREIGIA SGEPLGRGGL PPSVYTLLPR
LVERAGMSEN GSITALYTVL IEQDSMNDPV ADEVRSLLDG HIVLSRKLAE RGHYPAIDVS
ASISRILSNV TGREHQRANN RLRQLLAAYK QVEMLLRLGE YQAGADPVTD CAVQLNEAIN
AFLRQDLREP VPLQETLDRL LQLTSQLPE
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