Gene Psyr_1202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1202 
Symbol 
ID3366696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1360091 
End bp1360438 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content58% 
IMG OID637651543 
Productnegative regulator of hrp expression HrpV 
Protein accessionYP_234294 
Protein GI66044453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0909611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAGG TCGAGGAGAA AACAGCGTTC TACTACAACG TTGCGGCACA GAGCCCTGCG 
GTCTGGCCGG TGGCAAACGG AGTCTCGTTC GTCAGCCGCC GCGAGCACCA TGACTGGGGC
ATTGCGCTGC ACATCGAGGG TCGAGCGCTG CGTCCCGAAC AACTCAGAGA GGCGCTGCAA
CTGAGGTTTT CAGAAGCCGA ACGATTCAAT GACTACTTTC TGTTCCTGGA TATGCGGCGT
GATTTCGTCG TGTGGCACGC GGTGAGCGAC GCCCCCCATG CCGTCACCAA TCTGGATGAT
ATCCGCCGAA ACGAACTGAT ACTGGCAGGC CTGGATCATC TGGCTTAG
 
Protein sequence
MIEVEEKTAF YYNVAAQSPA VWPVANGVSF VSRREHHDWG IALHIEGRAL RPEQLREALQ 
LRFSEAERFN DYFLFLDMRR DFVVWHAVSD APHAVTNLDD IRRNELILAG LDHLA