| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1195 |
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| Symbol | HrcJ |
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| ID | 3366689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1355109 |
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| End bp | 1355915 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637651536 |
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| Product | type III secretion protein HrcJ |
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| Protein accession | YP_234287 |
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| Protein GI | 66044446 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.105142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATTTC TGAGCGCAGG GCTGCTGCTG ATTTGCATGG TATTGCTCGG CGGCTGCAGT
GATGAAACCG ATCTGTTCAC CGGCTTGTCC GAGCAGGACT CCAACGAGGT CGTTGCCCGT
CTTGCCGATC AGCATATCGA CGCGCGTAAA CGTCTGGAAA AAACCGGCGT TGTCGTCACC
GTCGCGACCA GCGACATGAA CCGCGCCGTC AGGGTGCTCA ATGCTGCCGG CCTGCCACGC
CAGTCTCGCG CCAGTCTGGG GGATATCTTC AAGAAAGAAG GGGTCATTTC GACCCCGCTC
GAAGAGCGCG CCCGCTACAT CTATGCCCTG TCTCAGGAAC TCGAAGCGAC GCTTTCGCAG
ATAGACGGCG TCATCGTTGC CAGGGTGCAC GTGGTACTTC CGGAACGCAT CGCACCGGGT
GAACCGGTGC AACCTGCCTC TGCTGCGGTG TTCATCAAAC ACTCCGCAGC GCTTGACCCG
GACAGCGTGC GTGGGCGCAT TCAACAGATG GTCGCCAGCA GTATCCCCGG CATGTCGACG
CAATCGGCAG AGTCGAAAAA GTTTTCCATT GTGTTCGTAC CGGCTACCGA GTTTCAGGAA
ACCACGCAGT GGGTCAGTTT CGGACCGTTC AAGCTGGACA GCGCCAATCT GCCGTTCTGG
AACCTGATGC TTTGGCTGGT ACCGGTTGGC CTGGCGGTGT TGTTGCTGAT CATCGCGCTG
CTGTTGCGCA GTGACTGGCG CGCCTCGGTC CTTGGGCGGA TCGGCCTTGC CGGCCGTAGC
CGCTCGACCG TACCGGCGCG CGCCTGA
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| Protein sequence | MKFLSAGLLL ICMVLLGGCS DETDLFTGLS EQDSNEVVAR LADQHIDARK RLEKTGVVVT
VATSDMNRAV RVLNAAGLPR QSRASLGDIF KKEGVISTPL EERARYIYAL SQELEATLSQ
IDGVIVARVH VVLPERIAPG EPVQPASAAV FIKHSAALDP DSVRGRIQQM VASSIPGMST
QSAESKKFSI VFVPATEFQE TTQWVSFGPF KLDSANLPFW NLMLWLVPVG LAVLLLIIAL
LLRSDWRASV LGRIGLAGRS RSTVPARA
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