| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1191 |
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| Symbol | HrpS |
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| ID | 3366685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 1352287 |
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| End bp | 1353195 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651532 |
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| Product | type III transcriptional regulator HrpS |
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| Protein accession | YP_234283 |
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| Protein GI | 66044442 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0970395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCG ATGATGAATT TGACGATCAC CTGGATGCGG AGCGCGTACC CAATCTGGGG
ATCGTCGCCG AAAGTATTTC GCAGCTCGGC ATTGATGTCT TGCTGTCGGG CGAGACCGGT
ACCGGTAAAG ACACCATTGC CCGGCGCATT CACAACATGT CCGGGCGCCA GGGTCGTTTC
GTCCCGATGA ACTGCGCAGC CATTCCGGAA TCGCTCGCCG AGAGCGAGCT GTTCGGAGTG
GTGAGTGGGG CCTATACCGG CGCCGACCGC TCCCGAATGG GCTACATCGA GGCGGCGCAG
GGCGGAACCT TGTACCTGGA CGAGATCGAT AGCATGCCGC TCGCCCTCCA GGCCAAGCTG
CTGAGGGTGC TTGAAACCCG TGCACTGGAG CGTCTGGGTT CGACCTCCAC GATCAACCTG
GATATCTGTG TGATTGCCTC GGCCCAGGCC TGTCTGGACG ACGCCGTCGA AGAGGGGAAG
TTTCGGCGCG ACCTGTACTT TCGCCTGAAC GTGCTGACCC TCAAACTGCC GCCGCTGCGC
GATCAGCCCG AGCGTATCCT GCCGCTGTTC ACCCGGTTTG TGGCGGCGTC GGCCAAAGAA
CTGAGCGTCC CGATTCCCGA TGTATGTCCG TTGCTTCAGC AGGTACTGAC GGGGCATCAC
TGGCCCGGCA ATATCCGCGA GCTCAAGGCC GCTGCAAAGC GCCATGTATT GGGCTTTCCT
CTGCTTGGGG CTGACTCGCA GACCGAAGAG CACCTGGCGT GCGGGCTCAA GTTCCAGCTG
CGGGCGATCG AAAAGGCCTT GATTCAGCAA GCGCTCAAGC GCCACCGCAA TTGCATCGAC
GCGGCCAGCC TGGAGCTCGA TATCCCACGT CGTACGCTCT ACCGCCGCAT CAAGGAATTG
AGCATCTGA
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| Protein sequence | MNLDDEFDDH LDAERVPNLG IVAESISQLG IDVLLSGETG TGKDTIARRI HNMSGRQGRF
VPMNCAAIPE SLAESELFGV VSGAYTGADR SRMGYIEAAQ GGTLYLDEID SMPLALQAKL
LRVLETRALE RLGSTSTINL DICVIASAQA CLDDAVEEGK FRRDLYFRLN VLTLKLPPLR
DQPERILPLF TRFVAASAKE LSVPIPDVCP LLQQVLTGHH WPGNIRELKA AAKRHVLGFP
LLGADSQTEE HLACGLKFQL RAIEKALIQQ ALKRHRNCID AASLELDIPR RTLYRRIKEL
SI
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