Gene Psyr_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1175 
Symbol 
ID3366669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1329470 
End bp1330096 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content59% 
IMG OID637651516 
Productglutathione S-transferase 
Protein accessionYP_234267 
Protein GI66044426 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.275426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.372199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTG TCCATCACCT GAACAACTCA CGTTCGCAGC GTATTTTGTG GCTGCTCGAA 
GAGCTCGACC TGCCCTACGA AATCAAACGT TATCAGCGCG ACCCGAAAAC CAACCTTGCG
CCACCCGAGC TCAAGGCGGT GCATCCGCTG GGCAAATCAC CTGTCATCGA AGATGGTCCG
CACGTCGTCA TTGAGTCCGG TGCCATTGTC GACTACCTGA TTCGCCGCCA TGGCGACGGC
CGCCTGCAGC CGGACCCTGC CAGCGCTACT TACGACGAAT ACGTGCAATG GCTGCATTTT
GCTGAAGGTT CGGCGATTCT GCCGCTGATG CTCAACCTGT ACGTCGGACG CCTGGGTGAC
GCGGGCGCGC CGCTGCATCC GCGTATCCAG TCGGAGCTGG CCAACTATCT GGGCTATCTG
AATGAGGCTT TGGGGCTGAC GCCATATCTG CTTGGCGACG AGCTGAGCGG CGCGGACATT
CAGATGAGCT TCATTGGCGA GTTCGCCAAG GCCCAGGGAA TGCTGCAGTC CTACCCGAAT
GTGACCGCAT GGGTTGAAAG ACTGCAGGGC AGACCTGCGT ACCGCAAGGC TTTGGAGCAG
GGCGGCGAAT ATTCCTTTGC CAAGTAA
 
Protein sequence
MITVHHLNNS RSQRILWLLE ELDLPYEIKR YQRDPKTNLA PPELKAVHPL GKSPVIEDGP 
HVVIESGAIV DYLIRRHGDG RLQPDPASAT YDEYVQWLHF AEGSAILPLM LNLYVGRLGD
AGAPLHPRIQ SELANYLGYL NEALGLTPYL LGDELSGADI QMSFIGEFAK AQGMLQSYPN
VTAWVERLQG RPAYRKALEQ GGEYSFAK