Gene Psyr_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1160 
Symbol 
ID3366654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1314808 
End bp1315554 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content50% 
IMG OID637651501 
Producthypothetical protein 
Protein accessionYP_234252 
Protein GI66044411 
COG category[S] Function unknown 
COG ID[COG4185] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGTAC CTAGGCTACG CGTATTTGCC GGCCCTAACG GTTCAGGCAA GAGCACCATC 
AAGCGCATAC TTGATCCTGA CCTGATTTAC ATTTACGTCA ATGCCGACGA CCTTGAGCGT
GAGGCGGGCG ATAATGGGTT TATAGATCTT TCCCCTTTTT CGATTGAAGA TGATCAGCAA
GCTTTCCGGG CGTTTTTCTC CTCGCACCCC CTCATTGAAA GAGAACGGTT GGCTTGTCAG
GCTGAGCATT TCTTCATCAC CGCCCAATCG CTATTGATTG AAGGCATCAC ATTCACTTCT
TACCACGCCT CGGTCGTTGC TGATTTCATC AGGCATCAAT TGCTTGTTCA GTCCGCCAGC
TTCACGTTTG AGACAGTCAT GTCGGACCGT TCCAAAGTGG AGTTCATCAA AAAAGCCAAG
GCGATGGGAT ACCGGACTTA TTTATATTTC GTTGCCACTG AAAACCCGAG TATCAATATC
AACCGGATCG CGATTCGTGT TGGCGAGGGC GGGCACAATG TCACCCCTGA GAAAGTGCAT
GCCCGTTATC ACAGATGCCT GGCGTTACTG CCGGAGGCTA TCCAGGCAAC GAGTCGAGCA
TACTTGTTTG ATAACTCTGG AGATACTGCA GAACTCGAAG CAGAAATCAC AGACGCTTCG
ATTGTCGAAT ACAAAATTGA CGAAGTCCCG GAGTGGTGCA AAGTGGCCAT TGAAGGGCTT
GAACGGCTTA TCGATCCGGA ACCTTAG
 
Protein sequence
MPVPRLRVFA GPNGSGKSTI KRILDPDLIY IYVNADDLER EAGDNGFIDL SPFSIEDDQQ 
AFRAFFSSHP LIERERLACQ AEHFFITAQS LLIEGITFTS YHASVVADFI RHQLLVQSAS
FTFETVMSDR SKVEFIKKAK AMGYRTYLYF VATENPSINI NRIAIRVGEG GHNVTPEKVH
ARYHRCLALL PEAIQATSRA YLFDNSGDTA ELEAEITDAS IVEYKIDEVP EWCKVAIEGL
ERLIDPEP